Factsheet for Bra007811.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76763	Canola	plastid	94.86	95.13
CDY56275	Canola	cytosol	40.86	93.46
AT2G25200.1	Thale cress	plastid	75.43	74.58
Bra028555.1-P	Field mustard	nucleus	39.71	40.52
VIT_04s0008g05970.t01	Wine grape	plastid	42.57	40.16
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	40.57	36.6
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	31.71	29.21
Bra040410.1-P	Field mustard	cytosol, nucleus, peroxisome	22.29	27.27
TraesCS5A01G226100.1	Wheat	plastid	32.0	27.05
Bra009991.1-P	Field mustard	plastid	22.57	26.96
TraesCS5D01G233300.1	Wheat	plastid	31.71	26.81
TraesCS5B01G224600.1	Wheat	plastid	31.71	26.81
Zm00001d032164_P001	Maize	plastid	30.86	26.73
Zm00001d050436_P001	Maize	plastid	30.86	26.47
GSMUA_Achr3P04550_001	Banana	plastid	19.71	25.94
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	28.57	25.71
Os08t0439600-00	Rice	plastid	29.71	25.62
EES13906	Sorghum	plastid	30.57	25.6
Bra015139.1-P	Field mustard	nucleus	22.0	25.5
Zm00001d045119_P001	Maize	plastid	25.43	25.36
Zm00001d020470_P001	Maize	plastid	30.0	24.94
EER87970	Sorghum	plastid	25.43	24.79
Os06t0181800-00	Rice	plastid	24.86	24.79
HORVU5Hr1G065520.1	Barley	plastid	32.0	24.78
TraesCS7A01G146000.1	Wheat	plastid	24.0	24.63
Bra040118.1-P	Field mustard	plastid	19.71	24.47
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	28.29	24.32
Os09t0416600-02	Rice	plastid	30.86	24.32
Zm00001d005752_P001	Maize	plastid	29.14	24.23
Bra023071.1-P	Field mustard	cytosol	22.0	23.99
KXG35635	Sorghum	plastid	30.29	23.77
Bra034367.1-P	Field mustard	plastid	22.0	23.69
Bra036180.1-P	Field mustard	plastid	21.71	23.6
Bra037498.1-P	Field mustard	plastid	20.57	22.29
Bra020708.1-P	Field mustard	mitochondrion	20.29	22.05
Bra001495.1-P	Field mustard	cytosol	18.29	21.99
TraesCS7D01G147500.1	Wheat	plastid	24.29	21.63
TraesCS7B01G048400.1	Wheat	plastid	24.29	21.63
HORVU7Hr1G029920.1	Barley	mitochondrion	24.57	21.61
Bra036119.1-P	Field mustard	mitochondrion	22.57	20.68
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	12.0	16.15
Zm00001d037575_P001	Maize	cytosol	10.29	14.94

Protein Annotations

EnsemblPlants:Bra007811.1	EnsemblPlants:Bra007811.1-P	EnsemblPlantsGene:Bra007811	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF3
PFAM:PF05910	SEG:seg	UniParc:UPI0002542CFD	UniProt:M4CUB7	MapMan:35.2	:

Description

AT2G25200 (E=2e-137) | unknown protein

Coordinates

chrA09:+:31003127..31004179

Molecular Weight (calculated)

40100.9 Da

IEP (calculated)

10.139

GRAVY (calculated)

-0.404

Length

350 amino acids

Sequence
(BLAST)

001: MRSFTHSRGG SSPLSACFHP STAAATNEDT SSSLPSPSAT SHFPGDLPNP TTTCTYHTNV GVFFLSWSQS FLRRSLHLHF YHCSSANCYL HSPDCYSHSV
101: PFTFRLEIKP LTFWRKHGSK KISRKPDIRV TWDLTHARFG SGPDPVSGFY VAVLVSGKVG LLVGDSLKHR PKRQILVSRG ENLFGNRVYH TKIKIKGKVR
201: EIGIDVKVHD DATLRFSVDN KKVLKIEQLQ WKFRGNAKVV IDDLTIQLSW DVYNWMFVDK DKANLVKVPA VFLLRFENQE VEGNDVLMMK KRERDYLVLG
301: KENSRMLSFR ASSYGHWSSS VMEWSTCKEE DERSFGHKSW FSLVVYAWRK

Best Arabidopsis Sequence Match ( AT2G25200.1 )
(BLAST)

001: MKISALGRGG SSPLSACFHP SATAINDDLP SALPSPSNPS YISTSGDATT TCQYHTNVGV FFLSWSRSFL RRSLHLHFYS CNSTNCYLHS LDCYRHSIPF
101: AFRLEIKPLT FWRKNGSKKL SRKPDIRVVW DLTHAKFGSG PDPESGFYVA VFVSGEVGLL VGGGNLKQRP RRQILVSKKE NLFGNRVYST KIMIQGKLRE
201: ISIDVKVVND DASLRFSVDD KSVLKISQLQ WKFRGNTKIV IDGVTIQISW DVFNWLFGGK DKVKPDKIPA VFLLRFENQE VEGNDVLMMN KRVRDDVILR
301: KENCRTPSFW ASTYSHWSSS RMSSVMEWSS CREEDERSFG SKSWFSLIIY AWRK

Arabidopsis Description

At2g25200 [Source:UniProtKB/TrEMBL;Acc:Q9SIS2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.