Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045119_P001 | Maize | plastid | 60.17 | 41.31 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 21.16 | 19.17 |
| CDY56275 | Canola | cytosol | 10.37 | 16.34 |
| Zm00001d050436_P001 | Maize | plastid | 26.56 | 15.69 |
| Zm00001d032164_P001 | Maize | plastid | 26.14 | 15.59 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 24.9 | 15.42 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 24.07 | 15.26 |
| Zm00001d020470_P001 | Maize | plastid | 26.14 | 14.96 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 24.9 | 14.74 |
| Zm00001d005752_P001 | Maize | plastid | 25.31 | 14.49 |
| KRH05263 | Soybean | mitochondrion, plastid | 19.92 | 14.12 |
| Zm00001d015796_P001 | Maize | cytosol | 11.2 | 14.06 |
| KRH15788 | Soybean | plastid | 19.92 | 14.04 |
| PGSC0003DMT400068894 | Potato | plastid | 19.92 | 13.75 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 19.09 | 13.57 |
| CDY51100 | Canola | cytosol | 19.09 | 13.53 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 18.67 | 13.12 |
| Bra028555.1-P | Field mustard | nucleus | 18.67 | 13.12 |
| CDX97072 | Canola | nucleus | 20.75 | 12.92 |
| Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 20.75 | 12.89 |
| KRH61697 | Soybean | plastid | 16.6 | 12.86 |
| CDX69793 | Canola | nucleus | 19.5 | 12.5 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 19.92 | 12.34 |
| KRH52365 | Soybean | plastid | 16.6 | 12.01 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 17.84 | 11.59 |
| Zm00001d053654_P001 | Maize | plastid | 13.69 | 11.15 |
| Zm00001d034527_P001 | Maize | plastid | 12.86 | 10.54 |
| CDX76763 | Canola | plastid | 14.94 | 10.32 |
| Bra007811.1-P | Field mustard | plastid | 14.94 | 10.29 |
| AT2G25200.1 | Thale cress | plastid | 14.94 | 10.17 |
| Zm00001d013042_P001 | Maize | plastid | 12.03 | 9.97 |
| Zm00001d035694_P001 | Maize | cytosol | 12.45 | 9.87 |
| Zm00001d021869_P001 | Maize | plastid | 11.2 | 9.51 |
| Zm00001d031962_P001 | Maize | plastid | 12.45 | 9.49 |
| Zm00001d042425_P001 | Maize | plastid | 11.62 | 9.0 |
| Zm00001d052520_P001 | Maize | plastid | 11.62 | 8.78 |
| Zm00001d025337_P001 | Maize | cytosol | 12.45 | 8.7 |
| Zm00001d004919_P001 | Maize | plastid | 11.62 | 8.67 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 12.03 | 8.43 |
Protein Annotations
| EnsemblPlants:Zm00001d037575_P001 | EnsemblPlants:Zm00001d037575_T001 | EnsemblPlantsGene:Zm00001d037575 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF8 |
| PFAM:PF05910 | ProteinID:AQK84376.1 | SEG:seg | UniParc:UPI0002216152 | UniProt:A0A1D6LZ60 | MapMan:35.2 |
Description
DUF868 family protein
Coordinates
chr6:-:130072061..130073002
Molecular Weight (calculated)
26141.8 Da
IEP (calculated)
8.296
GRAVY (calculated)
-0.328
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MIADGAAADN VPAPPVKMEE AILKTAGRLQ GKRVIARSPF MTNPEQQLGP FLMCFSQLAR KKGNTPSQLM HILIHLVRIP GSGADIQERG KLGLRWKFHG
101: SERLDLPIGR RVRVTWDLHG WLFCPDATAA VFVLRFETSD AAEADDEGDT NENEAGPHVL RHPSFSFRNH QAHGSSDESW FSSDSDRTGW MRGPFRSGSD
201: TSPSVSVAST SAASSAASVA TVSEWAAMAA VASPRRVKSF A
101: SERLDLPIGR RVRVTWDLHG WLFCPDATAA VFVLRFETSD AAEADDEGDT NENEAGPHVL RHPSFSFRNH QAHGSSDESW FSSDSDRTGW MRGPFRSGSD
201: TSPSVSVAST SAASSAASVA TVSEWAAMAA VASPRRVKSF A
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.