Factsheet for Zm00001d003829_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018440_P002
Zm00001d051951_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27770.1	Zm00001d018440_P002	AT5G43320.1	21798944
AT2G27770.1	Zm00001d051951_P002	AT5G43320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025337_P001	Maize	cytosol	83.72	83.48
KXG26216	Sorghum	cytosol	87.21	80.43
TraesCS2B01G308700.1	Wheat	cytosol	75.58	77.61
TraesCS2D01G290200.1	Wheat	cytosol	74.71	77.41
TraesCS2A01G292300.1	Wheat	cytosol	75.0	76.11
Os04t0407500-00	Rice	cytosol, plastid	52.03	71.6
GSMUA_Achr3P03050_001	Banana	nucleus	39.24	45.92
GSMUA_Achr10P...	Banana	nucleus, plastid	39.83	44.92
GSMUA_Achr8P29560_001	Banana	nucleus	38.08	44.41
GSMUA_Achr8P07610_001	Banana	cytosol	36.92	44.1
GSMUA_Achr2P20270_001	Banana	cytosol	38.95	43.79
GSMUA_Achr11P...	Banana	plastid	33.14	39.31
Zm00001d052520_P001	Maize	plastid	34.3	36.99
Zm00001d004919_P001	Maize	plastid	34.01	36.22
VIT_08s0007g03840.t01	Wine grape	nucleus	31.69	36.21
VIT_06s0061g01360.t01	Wine grape	plastid	30.81	35.45
KRH67854	Soybean	cytosol	31.4	35.06
KRG96144	Soybean	nucleus	31.1	34.85
KRH26585	Soybean	plastid	29.65	33.89
Zm00001d015796_P001	Maize	cytosol	18.9	33.85
KRH22720	Soybean	plastid	29.65	33.77
Zm00001d031962_P001	Maize	plastid	30.81	33.54
PGSC0003DMT400006889	Potato	nucleus	14.53	32.68
KRH25175	Soybean	cytosol	29.65	32.18
Zm00001d021869_P001	Maize	plastid	26.45	32.04
Zm00001d013042_P001	Maize	plastid	27.03	31.96
CDX77134	Canola	cytosol, plastid	29.94	31.89
AT2G27770.1	Thale cress	plastid	29.36	31.56
CDX79683	Canola	cytosol	29.07	31.55
CDX84556	Canola	cytosol	29.36	31.46
Bra023071.1-P	Field mustard	cytosol	29.36	31.46
PGSC0003DMT400018411	Potato	cytosol	27.62	31.35
Zm00001d034527_P001	Maize	plastid	26.74	31.29
KRH30504	Soybean	plastid	29.36	31.08
Bra034367.1-P	Field mustard	plastid	28.78	30.46
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	25.87	30.27
CDY30531	Canola	plastid	28.78	30.18
Solyc06g074500.1.1	Tomato	cytosol	26.45	30.03
AT2G36470.1	Thale cress	nucleus	27.91	29.36
Solyc11g066930.1.1	Tomato	nucleus, plastid	26.16	28.21
Zm00001d035694_P001	Maize	cytosol	24.13	27.3
Zm00001d053654_P001	Maize	plastid	23.26	27.03
Zm00001d042425_P001	Maize	plastid	24.42	27.01
CDY33155	Canola	cytosol	28.78	24.75
Zm00001d045119_P001	Maize	plastid	23.26	22.79
Zm00001d050436_P001	Maize	plastid	26.74	22.55
Zm00001d020470_P001	Maize	plastid	27.33	22.33
Zm00001d032164_P001	Maize	plastid	26.16	22.28
Zm00001d005752_P001	Maize	plastid	27.03	22.09
Zm00001d037575_P001	Maize	cytosol	8.43	12.03

Protein Annotations

EnsemblPlants:Zm00001d003829_P001	EnsemblPlants:Zm00001d003829_T001	EnsemblPlantsGene:Zm00001d003829	EntrezGene:103646516	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF16	PFAM:PF05910	ProteinID:ONM17796.1	SEG:seg	UniParc:UPI0002220E40	UniProt:A0A1D6EBU1
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:61176346..61177380

Molecular Weight (calculated)

36384.8 Da

IEP (calculated)

8.685

GRAVY (calculated)

-0.098

Length

344 amino acids

Sequence
(BLAST)

001: MKDLVSCFSE HAVRISDVAC SGSSAANAAA AAAGAPEAAG GRAPAVSAVT TAYRSRLAAS GKELLIDVTW SRAPDGPALS VAVHEAAAAA APRSRAAAPR
101: HLHRKKGSGT FTAGSCVVGV FWDYGAARYA GGAGPEPASG FYVAVVADAE FVLLLGDLSR GYVDRLHGGI PVAASRLARR RERFVGRGRW ATKARFLESG
201: DEHEIGVVLR DADADAEAWV TVDGLRVVQL RRLRWNFRGC HTIFLDGGAP VDMTWDLHGW LFHAHAPAAE LPHSSSSCAV FTFQARGASE AKLWTDDDCF
301: HYGEEPDKLP VTPTRRRQKA AAGGASGQGF CLLIQGFRGF SKNT

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.