Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84556 | Canola | cytosol | 99.69 | 99.69 |
| CDX79683 | Canola | cytosol | 97.2 | 98.42 |
| AT2G36470.1 | Thale cress | nucleus | 83.49 | 81.96 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 43.3 | 46.18 |
| KRH67854 | Soybean | cytosol | 43.61 | 45.45 |
| KRG96144 | Soybean | nucleus | 43.3 | 45.28 |
| PGSC0003DMT400006889 | Potato | nucleus | 21.18 | 44.44 |
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 38.32 | 41.84 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 37.38 | 40.82 |
| Bra034367.1-P | Field mustard | plastid | 38.32 | 37.85 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 35.2 | 37.05 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 34.89 | 36.6 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 33.33 | 36.27 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 31.15 | 34.72 |
| GSMUA_Achr11P... | Banana | plastid | 31.15 | 34.48 |
| TraesCS5B01G130100.1 | Wheat | plastid | 32.09 | 32.49 |
| TraesCS5D01G137700.1 | Wheat | plastid | 32.4 | 32.4 |
| TraesCS5A01G130200.1 | Wheat | plastid | 31.78 | 32.38 |
| Zm00001d052520_P001 | Maize | plastid | 31.78 | 31.97 |
| TraesCS4D01G129600.1 | Wheat | plastid | 31.46 | 31.76 |
| HORVU5Hr1G041450.1 | Barley | plastid | 31.78 | 31.68 |
| OQU82880 | Sorghum | plastid | 32.4 | 31.61 |
| Zm00001d004919_P001 | Maize | plastid | 31.46 | 31.27 |
| TraesCS4A01G183900.1 | Wheat | plastid | 30.53 | 31.11 |
| TraesCS4B01G134800.1 | Wheat | plastid | 30.53 | 31.01 |
| Os04t0407500-00 | Rice | cytosol, plastid | 23.99 | 30.8 |
| Zm00001d025337_P001 | Maize | cytosol | 33.02 | 30.72 |
| TraesCS2B01G308700.1 | Wheat | cytosol | 31.78 | 30.45 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 31.46 | 30.42 |
| Os12t0149000-01 | Rice | plastid | 30.84 | 30.18 |
| KXG22966 | Sorghum | plastid | 30.53 | 29.97 |
| Bra040410.1-P | Field mustard | cytosol, nucleus, peroxisome | 26.48 | 29.72 |
| KXG26216 | Sorghum | cytosol | 34.27 | 29.49 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 31.46 | 29.36 |
| TraesCS2A01G292300.1 | Wheat | cytosol | 30.84 | 29.2 |
| Bra040118.1-P | Field mustard | plastid | 24.92 | 28.37 |
| Bra009991.1-P | Field mustard | plastid | 24.92 | 27.3 |
| TraesCS7D01G277700.1 | Wheat | plastid | 25.23 | 26.82 |
| TraesCS7A01G277900.1 | Wheat | plastid | 24.61 | 26.6 |
| TraesCS7B01G175700.1 | Wheat | plastid | 24.92 | 26.49 |
| HORVU7Hr1G058790.3 | Barley | plastid | 24.92 | 26.4 |
| Zm00001d031962_P001 | Maize | plastid | 24.92 | 25.32 |
| Bra015139.1-P | Field mustard | nucleus | 23.05 | 24.5 |
| Bra028555.1-P | Field mustard | nucleus | 23.68 | 22.16 |
| Bra036180.1-P | Field mustard | plastid | 22.12 | 22.05 |
| Bra007811.1-P | Field mustard | plastid | 23.99 | 22.0 |
| Bra036119.1-P | Field mustard | mitochondrion | 25.55 | 21.47 |
| Bra001495.1-P | Field mustard | cytosol | 19.31 | 21.31 |
| HORVU4Hr1G001870.2 | Barley | cytosol | 22.74 | 21.22 |
| Bra020708.1-P | Field mustard | mitochondrion | 21.18 | 21.12 |
| TraesCS4B01G012200.1 | Wheat | cytosol | 22.74 | 20.68 |
| TraesCS4D01G010300.1 | Wheat | cytosol | 22.43 | 20.51 |
| Bra037498.1-P | Field mustard | plastid | 20.56 | 20.43 |
| TraesCS4A01G302100.1 | Wheat | cytosol | 22.43 | 20.34 |
| Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 23.68 | 19.59 |
Protein Annotations
| EnsemblPlants:Bra023071.1 | EnsemblPlants:Bra023071.1-P | EnsemblPlantsGene:Bra023071 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF16 |
| PFAM:PF05910 | SEG:seg | UniParc:UPI000253FF19 | UniProt:M4E2S0 | MapMan:35.2 | : |
Description
AT2G36470 (E=1e-119) | unknown protein
Coordinates
chrA03:-:8524041..8525006
Molecular Weight (calculated)
35038.0 Da
IEP (calculated)
8.759
GRAVY (calculated)
-0.503
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGLAACYSE HAIKVSDTYC SGPSNHTYIS PTLPPSIPDT VTTTYTSSSD KPVSVSPTWS DNLTVVISTT PAKSYSVSLK KPKGSRKLTS SSGSLNAEIL
101: WDLTEAEYDN GGPEPTRGFS VAVVVNSEVV LRVGDVDRRD TSSWRVSRTE RYSGSCWLST KAKFSDAGSK HEIQIQCGGG GGGGGGGGGG GEEGYLWKLK
201: SPETMSVWVD KRKVFQVKKL KWNFRGNQTM FFDGMLIDMM WDLHDWFFKE TASSSSTGSK TTSSSSSSSS SSSPPCAVFM FRRRSGLDSR LWLEEDEEEN
301: KKIGLREAKH SFSLVICVSK K
101: WDLTEAEYDN GGPEPTRGFS VAVVVNSEVV LRVGDVDRRD TSSWRVSRTE RYSGSCWLST KAKFSDAGSK HEIQIQCGGG GGGGGGGGGG GEEGYLWKLK
201: SPETMSVWVD KRKVFQVKKL KWNFRGNQTM FFDGMLIDMM WDLHDWFFKE TASSSSTGSK TTSSSSSSSS SSSPPCAVFM FRRRSGLDSR LWLEEDEEEN
301: KKIGLREAKH SFSLVICVSK K
001: MRGLAACYSE HAIKVSDTYC SGPSNHSYIS PTLPPSIPDT VTTTYRSNLP SSDKPVSVSL TWSDNLTVVI STPPKSYSVS LRKPKGSRKL TSSSGSLNAE
101: ILWDLSEAEY ENNGPEPIRR FFVVVVVNSE ITLGVGDVDH ERDTSSSSSW RVSKTERFSG TCWLTTKAQF SDVGRKHEIQ IQCGGGGGGG GEEGYLWKVK
201: SPETMSVYVD KRKVFSVKKL KWNFRGNQTM FFDGMLIDMM WDLHDWFYKE TLSSVSTSSS SKTASSSSSS STSSSTPPCA VFMFRRRSGL DSRLWIDEDE
301: QESEMKKNIG SRDEKHSFSL IICASKK
101: ILWDLSEAEY ENNGPEPIRR FFVVVVVNSE ITLGVGDVDH ERDTSSSSSW RVSKTERFSG TCWLTTKAQF SDVGRKHEIQ IQCGGGGGGG GEEGYLWKVK
201: SPETMSVYVD KRKVFSVKKL KWNFRGNQTM FFDGMLIDMM WDLHDWFYKE TLSSVSTSSS SKTASSSSSS STSSSTPPCA VFMFRRRSGL DSRLWIDEDE
301: QESEMKKNIG SRDEKHSFSL IICASKK
Arabidopsis Description
DUF868 family protein, putative (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SJQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.