Factsheet for Bra008998.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
plasma membrane 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69793	Canola	nucleus	96.13	99.2
AT5G11000.1	Thale cress	cytosol, plastid	87.89	87.66
Bra028555.1-P	Field mustard	nucleus	72.42	81.92
PGSC0003DMT400068894	Potato	plastid	45.1	50.14
Solyc08g028780.1.1	Tomato	mitochondrion	43.56	49.85
KRH52365	Soybean	plastid	42.53	49.55
KRH61697	Soybean	plastid	37.63	46.95
KRH15788	Soybean	plastid	38.92	44.15
KRH05263	Soybean	mitochondrion, plastid	38.4	43.82
Bra007811.1-P	Field mustard	plastid	36.6	40.57
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	35.31	36.05
TraesCS5B01G224600.1	Wheat	plastid	37.37	35.02
TraesCS5A01G226100.1	Wheat	plastid	37.37	35.02
Zm00001d050436_P001	Maize	plastid	36.6	34.8
TraesCS5D01G233300.1	Wheat	plastid	37.11	34.78
GSMUA_Achr3P04550_001	Banana	plastid	23.71	34.59
Os08t0439600-00	Rice	plastid	35.82	34.24
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	34.02	33.93
Bra040410.1-P	Field mustard	cytosol, nucleus, peroxisome	25.0	33.92
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	35.57	33.91
Bra009991.1-P	Field mustard	plastid	25.52	33.79
EES13906	Sorghum	plastid	36.34	33.73
Zm00001d032164_P001	Maize	plastid	35.05	33.66
Bra040118.1-P	Field mustard	plastid	23.97	32.98
Zm00001d020470_P001	Maize	plastid	35.05	32.3
Zm00001d005752_P001	Maize	plastid	35.05	32.3
Os09t0416600-02	Rice	plastid	36.86	32.21
HORVU5Hr1G065520.1	Barley	plastid	37.37	32.08
KXG35635	Sorghum	plastid	36.08	31.39
Bra015139.1-P	Field mustard	nucleus	23.97	30.79
Os06t0181800-00	Rice	plastid	27.32	30.2
Zm00001d045119_P001	Maize	plastid	27.06	29.91
Bra036180.1-P	Field mustard	plastid	24.23	29.19
EER87970	Sorghum	plastid	26.8	28.97
Bra001495.1-P	Field mustard	cytosol	21.13	28.18
TraesCS7A01G146000.1	Wheat	plastid	24.74	28.15
Bra037498.1-P	Field mustard	plastid	23.2	27.86
Bra020708.1-P	Field mustard	mitochondrion	22.42	27.02
Bra034367.1-P	Field mustard	plastid	21.91	26.15
Bra036119.1-P	Field mustard	mitochondrion	25.52	25.92
TraesCS7B01G048400.1	Wheat	plastid	25.77	25.45
TraesCS7D01G147500.1	Wheat	plastid	25.26	24.94
HORVU7Hr1G029920.1	Barley	mitochondrion	25.0	24.37
Bra023071.1-P	Field mustard	cytosol	19.59	23.68
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	14.69	21.92
Zm00001d037575_P001	Maize	cytosol	12.89	20.75

Protein Annotations

EnsemblPlants:Bra008998.1	EnsemblPlants:Bra008998.1-P	EnsemblPlantsGene:Bra008998	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF3
PFAM:PF05910	SEG:seg	UniParc:UPI00025444D6	UniProt:M4CXQ1	MapMan:35.2	:

Description

AT5G11000 (E=5e-137) | unknown protein

Coordinates

chrA10:+:14781214..14782380

Molecular Weight (calculated)

43186.8 Da

IEP (calculated)

9.279

GRAVY (calculated)

-0.483

Length

388 amino acids

Sequence
(BLAST)

001: MSPSRNIPAW LRPTSDHPPH PPPPQSPSPL VSGDPNLTTC LYQTDHGVFY LTWSRTFLGG HSLNLFLHSQ DYYNRSSPLS FSSADLSLSS AVSFHLNLNT
101: LAFWRRRGSR SVSPKIQVFW DLTRAKFDSG SEPRSGFYIA VVVDGEMGLL VGDSVKEAYS RVKSAKPPTN PQALLLRKEH VFGARVFSTK ARFGGKSREI
201: SIDCRVDEDA RLCFSVDSKQ VLQIKRLRWK FRGNEKVEID GVPVQISWDV YNWLFQSKAS GEGGHAVFMF RFESDPEAEE EEEEDERKEE ERSKNDVVVW
301: KPKQKQCGSS LGIKGIVEWR KMKRRFVKSK RSSSSSSISM SSASSACSSS VMEWASSADE AEYGGGGSAG AGAGNGLGFS LLVYAWIK

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.