Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- golgi 1
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 66.34 | 69.41 |
GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 57.25 | 61.32 |
GSMUA_Achr3P04550_001 | Banana | plastid | 37.59 | 57.52 |
Zm00001d020470_P001 | Maize | plastid | 47.91 | 46.32 |
Zm00001d050436_P001 | Maize | plastid | 46.19 | 46.08 |
TraesCS5A01G226100.1 | Wheat | plastid | 46.68 | 45.89 |
TraesCS5B01G224600.1 | Wheat | plastid | 46.68 | 45.89 |
TraesCS5D01G233300.1 | Wheat | plastid | 46.44 | 45.65 |
EES13906 | Sorghum | plastid | 45.7 | 44.5 |
Zm00001d005752_P001 | Maize | plastid | 45.95 | 44.42 |
Zm00001d032164_P001 | Maize | plastid | 43.73 | 44.06 |
KXG35635 | Sorghum | plastid | 48.16 | 43.95 |
Os08t0439600-00 | Rice | plastid | 43.73 | 43.84 |
Os09t0416600-02 | Rice | plastid | 46.19 | 42.34 |
HORVU5Hr1G065520.1 | Barley | plastid | 46.68 | 42.04 |
PGSC0003DMT400068894 | Potato | plastid | 33.91 | 39.54 |
Os06t0181800-00 | Rice | plastid | 33.17 | 38.46 |
KRH52365 | Soybean | plastid | 31.45 | 38.44 |
Solyc08g028780.1.1 | Tomato | mitochondrion | 31.94 | 38.35 |
Zm00001d045119_P001 | Maize | plastid | 32.92 | 38.18 |
VIT_04s0008g05970.t01 | Wine grape | plastid | 34.64 | 38.01 |
KRH15788 | Soybean | plastid | 31.45 | 37.43 |
EER87970 | Sorghum | plastid | 32.68 | 37.05 |
KRH61697 | Soybean | plastid | 28.26 | 36.98 |
TraesCS7A01G146000.1 | Wheat | plastid | 30.96 | 36.95 |
KRH05263 | Soybean | mitochondrion, plastid | 30.71 | 36.76 |
CDY51100 | Canola | cytosol | 30.71 | 36.76 |
CDX85733 | Canola | cytosol, nucleus, plastid | 30.47 | 36.15 |
CDX97072 | Canola | nucleus | 34.15 | 35.92 |
CDX69793 | Canola | nucleus | 33.17 | 35.9 |
Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 33.91 | 35.57 |
Bra028555.1-P | Field mustard | nucleus | 29.73 | 35.28 |
AT5G11000.1 | Thale cress | cytosol, plastid | 33.66 | 35.22 |
GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 22.36 | 34.87 |
GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 22.36 | 34.47 |
TraesCS7B01G048400.1 | Wheat | plastid | 31.45 | 32.57 |
GSMUA_Achr5P24690_001 | Banana | cytosol | 23.1 | 32.41 |
Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 20.64 | 32.31 |
TraesCS7D01G147500.1 | Wheat | plastid | 30.96 | 32.06 |
HORVU7Hr1G029920.1 | Barley | mitochondrion | 30.71 | 31.41 |
GSMUA_Achr10P... | Banana | cytosol | 24.32 | 31.13 |
GSMUA_AchrUn_... | Banana | plastid | 21.13 | 30.61 |
CDY56275 | Canola | cytosol | 11.3 | 30.07 |
GSMUA_Achr8P07610_001 | Banana | cytosol | 20.15 | 28.47 |
CDX76763 | Canola | plastid | 24.32 | 28.37 |
Bra007811.1-P | Field mustard | plastid | 24.32 | 28.29 |
GSMUA_Achr3P03050_001 | Banana | nucleus | 20.39 | 28.23 |
AT2G25200.1 | Thale cress | plastid | 23.83 | 27.4 |
GSMUA_Achr2P20270_001 | Banana | cytosol | 20.39 | 27.12 |
GSMUA_Achr11P... | Banana | plastid | 19.16 | 26.9 |
GSMUA_Achr8P29560_001 | Banana | nucleus | 19.16 | 26.44 |
GSMUA_Achr10P... | Banana | nucleus, plastid | 19.66 | 26.23 |
GSMUA_AchrUn_... | Banana | cytosol | 17.69 | 25.81 |
Zm00001d037575_P001 | Maize | cytosol | 14.74 | 24.9 |
GSMUA_Achr3P12010_001 | Banana | cytosol | 15.23 | 22.46 |
Protein Annotations
EnsemblPlants:GSMUA_Achr10P30690_001 | EnsemblPlants:GSMUA_Achr10T30690_001 | EnsemblPlantsGene:GSMUA_Achr10G30690_001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF3 |
PFAM:PF05910 | SEG:seg | UniParc:UPI0002952B4B | UniProt:M0RMU3 | MapMan:35.2 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G30690_001]
Coordinates
chr10:+:32969555..32970778
Molecular Weight (calculated)
44283.7 Da
IEP (calculated)
9.826
GRAVY (calculated)
-0.592
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDRLPSCFG GGGATTRGTP TSTMAGPNLT TSIYDTHLGV ASLTWSRAIV GLTLLADLRL SGAEPGEDDE EGERLRFRVR PWLPWKRRGS RRFSLRDRSC
101: HRRVEFAWDL SRASFHTGGS GRPEPASGFF VAVAFDGEML LVAGDLVEEA YKKTKARRPI APFSNPTPTA RREHVVLGTS GGPRSYRTMA RFGGRNREIS
201: IELGPKDREP EAGMAVAVDG EKVVHVQRLR WKFRGTEKVE VESGARMQVS WDLHDWLFQS TADAALSDAA VPTAAERGHA VFVFRFEEEE EEVAKAAEGY
301: SGKVSGGPYG GHSGNGAYKG TVFGGHPGKT RNWSESSSNG GGGAETTAAQ RKRKSRRKDL LKTTSSSSSA SSASSASSST VMEWASQEEM ELKRSDGFSL
401: LVYIREN
101: HRRVEFAWDL SRASFHTGGS GRPEPASGFF VAVAFDGEML LVAGDLVEEA YKKTKARRPI APFSNPTPTA RREHVVLGTS GGPRSYRTMA RFGGRNREIS
201: IELGPKDREP EAGMAVAVDG EKVVHVQRLR WKFRGTEKVE VESGARMQVS WDLHDWLFQS TADAALSDAA VPTAAERGHA VFVFRFEEEE EEVAKAAEGY
301: SGKVSGGPYG GHSGNGAYKG TVFGGHPGKT RNWSESSSNG GGGAETTAAQ RKRKSRRKDL LKTTSSSSSA SSASSASSST VMEWASQEEM ELKRSDGFSL
401: LVYIREN
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.