CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050436_P001	Maize	plastid	89.47	91.67
Zm00001d032164_P001	Maize	plastid	85.89	88.86
Os08t0439600-00	Rice	plastid	77.03	79.31
KXG35635	Sorghum	plastid	64.83	60.76
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	47.85	52.63
GSMUA_Achr3P04550_001	Banana	plastid	32.78	51.5
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	45.45	48.84
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	28.47	45.77
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	44.5	45.7
EER87970	Sorghum	plastid	35.89	41.78
Solyc08g028780.1.1	Tomato	mitochondrion	33.73	41.59
PGSC0003DMT400068894	Potato	plastid	34.45	41.26
KRH52365	Soybean	plastid	31.58	39.64
VIT_04s0008g05970.t01	Wine grape	plastid	33.49	37.74
CDY51100	Canola	cytosol	30.62	37.65
KRH61697	Soybean	plastid	27.99	37.62
CDX85733	Canola	cytosol, nucleus, plastid	30.38	37.03
CDX69793	Canola	nucleus	33.01	36.7
CDX97072	Canola	nucleus	33.73	36.43
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	33.73	36.34
Bra028555.1-P	Field mustard	nucleus	29.67	36.15
KRH15788	Soybean	plastid	29.43	35.96
KRH05263	Soybean	mitochondrion, plastid	28.95	35.59
AT5G11000.1	Thale cress	cytosol, plastid	33.01	35.48
CDX76763	Canola	plastid	26.55	31.81
AT2G25200.1	Thale cress	plastid	26.55	31.36
Bra007811.1-P	Field mustard	plastid	25.6	30.57
CDY56275	Canola	cytosol	11.0	30.07
EER93250	Sorghum	cytosol, plastid	20.57	29.55
EES04078	Sorghum	plastid	22.25	28.7
OQU84582	Sorghum	cytosol	21.05	27.41
KXG22966	Sorghum	plastid	21.05	26.91
OQU82880	Sorghum	plastid	21.05	26.75
KXG26216	Sorghum	cytosol	21.29	23.86
OQU90135	Sorghum	plastid	19.14	23.53
KXG21057	Sorghum	mitochondrion	21.05	22.98

Protein Annotations

EnsemblPlants:EES13906	EnsemblPlantsGene:SORBI_3007G139900	EntrezGene:8079539	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF14
PFAM:PF05910	ProteinID:EES13906	ProteinID:EES13906.1	RefSeq:XP_002444411.1	SEG:seg	UniParc:UPI0001A8795D
UniProt:C5YLB3	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:56883769..56886287

Molecular Weight (calculated)

45459.0 Da

IEP (calculated)

10.632

GRAVY (calculated)

-0.589

Length

418 amino acids

Sequence
(BLAST)

001: MPSPIAACFR CAAAPSSGAA GPSLATSVYE THLGLVALSW SRTSLGLSLR AVLRLSPLPT PGNSSSASGA GYLEDDADEE ETLAFRVRPW LLWRRRGSRR
101: FRAGDRLVDL AWDLSRARFP GSGSPEPSSG FFVAVVVDGE MVLAAGDLPD AAYRRTRARR PSGPRPVLLS RREHVSLRDA GAGRGRSHTT WVNVQGKERE
201: ISVDLVARGR ARDKDKDRDR SAASSREKEK DRADVGMSVS VDGERVLHVR RLRWKFRGSE RVDLGGGDGV QVSWDLHNWL FPPREPPPAD ASTHAHAHAV
301: LVFRFDLASG GEEREADLGK DPSSPDKAAT ARRNTGVWGG GYLARWGQRD WSETGSNGER RKGRGRRLAK ESSSSSASVA SSTASWASGS TVMDWASPEE
401: AEMQRGNGFS LLIYAWKS

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.