Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69793 | Canola | nucleus | 92.25 | 94.95 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 87.6 | 87.15 |
| CDY51100 | Canola | cytosol | 72.09 | 82.06 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 72.09 | 81.34 |
| PGSC0003DMT400068894 | Potato | plastid | 44.96 | 49.86 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 43.41 | 49.56 |
| KRH52365 | Soybean | plastid | 42.38 | 49.25 |
| KRH61697 | Soybean | plastid | 37.98 | 47.27 |
| CDY56275 | Canola | cytosol | 18.35 | 46.41 |
| KRH15788 | Soybean | plastid | 39.02 | 44.15 |
| KRH05263 | Soybean | mitochondrion, plastid | 38.5 | 43.82 |
| CDX76763 | Canola | plastid | 37.47 | 41.55 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 35.4 | 36.05 |
| CDY72112 | Canola | cytosol, peroxisome, plastid | 25.58 | 35.11 |
| Zm00001d050436_P001 | Maize | plastid | 36.69 | 34.8 |
| TraesCS5A01G226100.1 | Wheat | plastid | 37.21 | 34.78 |
| TraesCS5B01G224600.1 | Wheat | plastid | 37.21 | 34.78 |
| TraesCS5D01G233300.1 | Wheat | plastid | 36.95 | 34.54 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 23.51 | 34.21 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 34.37 | 34.19 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 35.92 | 34.15 |
| CDY50761 | Canola | cytosol, peroxisome, plastid | 25.32 | 34.15 |
| Os08t0439600-00 | Rice | plastid | 35.66 | 33.99 |
| CDX86191 | Canola | plastid | 25.58 | 33.79 |
| CDY52485 | Canola | plastid | 25.58 | 33.79 |
| EES13906 | Sorghum | plastid | 36.43 | 33.73 |
| Zm00001d032164_P001 | Maize | plastid | 35.14 | 33.66 |
| CDY21108 | Canola | plastid | 24.29 | 33.33 |
| CDY00013 | Canola | cytosol, plastid | 25.06 | 32.88 |
| Zm00001d020470_P001 | Maize | plastid | 35.14 | 32.3 |
| CDY30020 | Canola | cytosol, plastid | 23.51 | 32.27 |
| Os09t0416600-02 | Rice | plastid | 36.95 | 32.21 |
| Zm00001d005752_P001 | Maize | plastid | 34.88 | 32.07 |
| HORVU5Hr1G065520.1 | Barley | plastid | 37.21 | 31.86 |
| CDY00849 | Canola | nucleus | 23.51 | 31.27 |
| CDY27882 | Canola | nucleus | 23.51 | 31.27 |
| KXG35635 | Sorghum | plastid | 35.92 | 31.17 |
| Os06t0181800-00 | Rice | plastid | 27.65 | 30.48 |
| Zm00001d045119_P001 | Maize | plastid | 27.13 | 29.91 |
| CDY00069 | Canola | plastid | 23.77 | 29.87 |
| CDY19961 | Canola | plastid | 23.51 | 29.74 |
| CDY66553 | Canola | cytosol | 21.19 | 29.08 |
| CDX85324 | Canola | plastid | 20.67 | 28.78 |
| CDY05690 | Canola | mitochondrion, plastid | 22.22 | 28.67 |
| CDX86317 | Canola | plastid | 22.74 | 28.66 |
| EER87970 | Sorghum | plastid | 26.36 | 28.41 |
| CDX82547 | Canola | cytosol | 21.19 | 28.18 |
| TraesCS7A01G146000.1 | Wheat | plastid | 24.81 | 28.15 |
| CDY48744 | Canola | mitochondrion, plastid | 21.96 | 27.96 |
| CDX77134 | Canola | cytosol, plastid | 22.48 | 26.93 |
| TraesCS7B01G048400.1 | Wheat | plastid | 26.1 | 25.7 |
| TraesCS7D01G147500.1 | Wheat | plastid | 25.58 | 25.19 |
| CDY30531 | Canola | plastid | 21.19 | 25.0 |
| CDX79683 | Canola | cytosol | 20.16 | 24.61 |
| HORVU7Hr1G029920.1 | Barley | mitochondrion | 25.06 | 24.37 |
| CDX84556 | Canola | cytosol | 20.16 | 24.3 |
| CDY59819 | Canola | cytosol, mitochondrion, plasma membrane | 25.58 | 22.3 |
| Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 14.73 | 21.92 |
| Zm00001d037575_P001 | Maize | cytosol | 12.92 | 20.75 |
| CDY33155 | Canola | cytosol | 20.16 | 19.5 |
Protein Annotations
| EnsemblPlants:CDX97072 | EnsemblPlantsGene:GSBRNA2T00104048001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF3 | PFAM:PF05910 |
| ProteinID:CDX97072 | ProteinID:CDX97072.1 | SEG:seg | UniParc:UPI0004EB37D9 | MapMan:35.2 | : |
Description
BnaC09g45530D
Coordinates
chrLK031897:-:488677..489976
Molecular Weight (calculated)
42968.6 Da
IEP (calculated)
9.881
GRAVY (calculated)
-0.496
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSRNIPAW LRPNSDHPPP HPPQSPSPLV SGDPNLTTCL YQTDHGVFYL TWSRTFLGGH SLNLFLHSQD YYNRSSPLSF SSADLSLSSA VSFHLNLNTL
101: AFWRRRGSRS VSPKIQVFWD LTRAKFDSGS EPRSGFYIAV VVDGEMGLLV GDSVKEAYAR VKSAKPPTNP QALLLRKEHV FGARVFSTKA RFGGKSREIS
201: IDCRVDEDAR LCFSVDSKQV LQIKRLRWKF RGNEKVEIDG VPVQISWDVY NWLFQSKSSG EGGHAVFMFR FESDPEAEEE EEEERSKNKN DVAVWKPKPK
301: QKPKQCGSSL GIKGIAEWRK MKRRFVKSKR SSSSSSISMS SASSACSSSV MEWASSADEA EYGGGGSSGA GAGNGLGFSL LVYAWIK
101: AFWRRRGSRS VSPKIQVFWD LTRAKFDSGS EPRSGFYIAV VVDGEMGLLV GDSVKEAYAR VKSAKPPTNP QALLLRKEHV FGARVFSTKA RFGGKSREIS
201: IDCRVDEDAR LCFSVDSKQV LQIKRLRWKF RGNEKVEIDG VPVQISWDVY NWLFQSKSSG EGGHAVFMFR FESDPEAEEE EEEERSKNKN DVAVWKPKPK
301: QKPKQCGSSL GIKGIAEWRK MKRRFVKSKR SSSSSSISMS SASSACSSSV MEWASSADEA EYGGGGSSGA GAGNGLGFSL LVYAWIK
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.