CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84556	Canola	cytosol	98.74	97.51
Bra023071.1-P	Field mustard	cytosol	98.42	97.2
AT2G36470.1	Thale cress	nucleus	84.54	81.96
CDY33155	Canola	cytosol	83.28	66.0
VIT_08s0007g03840.t01	Wine grape	nucleus	43.53	45.85
KRH67854	Soybean	cytosol	44.16	45.45
KRG96144	Soybean	nucleus	43.53	44.95
PGSC0003DMT400006889	Potato	nucleus	20.82	43.14
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	37.85	40.82
GSMUA_Achr3P03050_001	Banana	nucleus	36.91	39.8
CDX77134	Canola	cytosol, plastid	38.49	37.77
CDY30531	Canola	plastid	37.54	36.28
GSMUA_Achr2P20270_001	Banana	cytosol	35.02	36.27
GSMUA_Achr10P...	Banana	nucleus, plastid	34.7	36.07
GSMUA_Achr8P29560_001	Banana	nucleus	32.81	35.25
GSMUA_Achr8P07610_001	Banana	cytosol	30.6	33.68
GSMUA_Achr11P...	Banana	plastid	30.6	33.45
TraesCS5B01G130100.1	Wheat	plastid	32.49	32.49
TraesCS5D01G137700.1	Wheat	plastid	32.81	32.4
TraesCS5A01G130200.1	Wheat	plastid	32.18	32.38
HORVU5Hr1G041450.1	Barley	plastid	32.49	31.99
TraesCS4D01G129600.1	Wheat	plastid	31.86	31.76
Zm00001d052520_P001	Maize	plastid	31.86	31.66
TraesCS4A01G183900.1	Wheat	plastid	31.23	31.43
TraesCS4B01G134800.1	Wheat	plastid	31.23	31.33
OQU82880	Sorghum	plastid	32.49	31.31
Zm00001d004919_P001	Maize	plastid	31.55	30.96
Zm00001d025337_P001	Maize	cytosol	33.12	30.43
Os04t0407500-00	Rice	cytosol, plastid	23.97	30.4
TraesCS2B01G308700.1	Wheat	cytosol	31.86	30.15
CDY72112	Canola	cytosol, peroxisome, plastid	26.81	30.14
TraesCS2D01G290200.1	Wheat	cytosol	31.55	30.12
KXG22966	Sorghum	plastid	30.91	29.97
Os12t0149000-01	Rice	plastid	30.91	29.88
CDY50761	Canola	cytosol, peroxisome, plastid	26.81	29.62
KXG26216	Sorghum	cytosol	34.38	29.22
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	31.55	29.07
TraesCS2A01G292300.1	Wheat	cytosol	30.91	28.91
CDY30020	Canola	cytosol, plastid	25.55	28.72
CDY21108	Canola	plastid	25.24	28.37
CDY00013	Canola	cytosol, plastid	26.18	28.14
CDX86191	Canola	plastid	25.24	27.3
CDY52485	Canola	plastid	24.92	26.96
TraesCS7D01G277700.1	Wheat	plastid	24.92	26.16
TraesCS7A01G277900.1	Wheat	plastid	24.29	25.93
TraesCS7B01G175700.1	Wheat	plastid	24.61	25.83
HORVU7Hr1G058790.3	Barley	plastid	24.61	25.74
CDY00849	Canola	nucleus	23.03	25.09
CDY27882	Canola	nucleus	23.03	25.09
Zm00001d031962_P001	Maize	plastid	24.92	25.0
CDY19961	Canola	plastid	22.4	23.2
CDY00069	Canola	plastid	22.4	23.05
CDY48744	Canola	mitochondrion, plastid	22.08	23.03
CDY05690	Canola	mitochondrion, plastid	21.77	23.0
CDY51100	Canola	cytosol	24.61	22.94
CDX85733	Canola	cytosol, nucleus, plastid	24.61	22.74
CDX76763	Canola	plastid	24.61	22.35
CDX85324	Canola	plastid	19.24	21.94
CDY66553	Canola	cytosol	19.24	21.63
HORVU4Hr1G001870.2	Barley	cytosol	23.34	21.51
CDX86317	Canola	plastid	20.82	21.5
TraesCS4B01G012200.1	Wheat	cytosol	23.34	20.96
CDX82547	Canola	cytosol	19.24	20.96
TraesCS4D01G010300.1	Wheat	cytosol	23.03	20.8
TraesCS4A01G302100.1	Wheat	cytosol	23.03	20.62
CDX69793	Canola	nucleus	24.29	20.48
CDX97072	Canola	nucleus	24.61	20.16
CDY59819	Canola	cytosol, mitochondrion, plasma membrane	25.87	18.47
CDY56275	Canola	cytosol	8.83	18.3

Protein Annotations

EnsemblPlants:CDX79683	EnsemblPlantsGene:GSBRNA2T00132482001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF16	PFAM:PF05910
ProteinID:CDX79683	ProteinID:CDX79683.1	SEG:seg	UniParc:UPI0004EEE704	MapMan:35.2	:

Description

BnaC03g20190D

Coordinates

chrLK031818:-:1560136..1561344

Molecular Weight (calculated)

34782.8 Da

IEP (calculated)

8.956

GRAVY (calculated)

-0.485

Length

317 amino acids

Sequence
(BLAST)

001: MRGLAACYSE HAIKVSDTYC SGPSNHTYIS PTLPPSIPDT VTTTYTSSDK PVSVSLTWSD NLTVVISTPA KSYSVSLKKP KGSRKLTSSS GSLNAEILWD
101: LTEAEYDNGG PEPTRGFSVA VVVNSEVVLR VGDVDRRDTS SWRVSRTERY SGSCWLSTKA KFSDAGSKHE IQIQCGGGGG GGGGGGGEEG YLWKQKSPET
201: MSVWVDKRKV FQVKKLKWNF RGNQTMFFDG MLIDMMWDLH DWFFKETASS SSTGSKTTSS SSSSSSSSSP PCAVFMFRRR SGLDSRLWLE EDEEENKKIG
301: LRVVKHSFSL VMCVSKK

Best Arabidopsis Sequence Match ( AT2G36470.1 )
(BLAST)

001: MRGLAACYSE HAIKVSDTYC SGPSNHSYIS PTLPPSIPDT VTTTYRSNLP SSDKPVSVSL TWSDNLTVVI STPPKSYSVS LRKPKGSRKL TSSSGSLNAE
101: ILWDLSEAEY ENNGPEPIRR FFVVVVVNSE ITLGVGDVDH ERDTSSSSSW RVSKTERFSG TCWLTTKAQF SDVGRKHEIQ IQCGGGGGGG GEEGYLWKVK
201: SPETMSVYVD KRKVFSVKKL KWNFRGNQTM FFDGMLIDMM WDLHDWFYKE TLSSVSTSSS SKTASSSSSS STSSSTPPCA VFMFRRRSGL DSRLWIDEDE
301: QESEMKKNIG SRDEKHSFSL IICASKK

Arabidopsis Description

DUF868 family protein, putative (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SJQ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.