CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67854	Soybean	cytosol	90.23	89.94
VIT_08s0007g03840.t01	Wine grape	nucleus	60.59	61.79
PGSC0003DMT400006889	Potato	nucleus	27.36	54.9
KRH22720	Soybean	plastid	51.47	52.32
KRH26585	Soybean	plastid	51.14	52.16
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	49.51	51.7
KRH25175	Soybean	cytosol	49.19	47.63
KRH30504	Soybean	plastid	50.16	47.38
GSMUA_Achr3P03050_001	Banana	nucleus	43.0	44.9
CDX79683	Canola	cytosol	44.95	43.53
CDX84556	Canola	cytosol	45.28	43.3
Bra023071.1-P	Field mustard	cytosol	45.28	43.3
GSMUA_Achr8P29560_001	Banana	nucleus	41.04	42.71
GSMUA_Achr10P...	Banana	nucleus, plastid	42.02	42.3
AT2G36470.1	Thale cress	nucleus	44.95	42.2
GSMUA_Achr2P20270_001	Banana	cytosol	41.69	41.83
GSMUA_Achr11P...	Banana	plastid	38.44	40.69
KRH68710	Soybean	plastid	36.16	37.37
GSMUA_Achr8P07610_001	Banana	cytosol	34.85	37.15
KRG96949	Soybean	cytosol, plastid	35.83	35.95
KRG92651	Soybean	cytosol	34.2	35.0
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	33.22	33.89
KRH32026	Soybean	cytosol, plastid	32.9	33.67
CDY33155	Canola	cytosol	43.65	33.5
KRH71412	Soybean	cytosol	32.57	33.22
KRG95548	Soybean	cytosol	32.25	32.89
Os04t0407500-00	Rice	cytosol, plastid	26.71	32.8
TraesCS2D01G290200.1	Wheat	cytosol	34.85	32.23
TraesCS5A01G130200.1	Wheat	plastid	32.57	31.75
TraesCS2B01G308700.1	Wheat	cytosol	34.53	31.64
TraesCS5B01G130100.1	Wheat	plastid	32.57	31.55
TraesCS5D01G137700.1	Wheat	plastid	32.9	31.46
TraesCS4A01G183900.1	Wheat	plastid	31.92	31.11
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	34.85	31.1
HORVU5Hr1G041450.1	Barley	plastid	32.57	31.06
TraesCS4B01G134800.1	Wheat	plastid	31.92	31.01
TraesCS2A01G292300.1	Wheat	cytosol	34.2	30.97
KRH67230	Soybean	cytosol	31.27	30.67
KXG22966	Sorghum	plastid	32.57	30.58
Zm00001d052520_P001	Maize	plastid	31.6	30.41
HORVU7Hr1G058790.3	Barley	plastid	29.97	30.36
TraesCS4D01G129600.1	Wheat	plastid	31.27	30.19
TraesCS7D01G277700.1	Wheat	plastid	29.32	29.8
OQU82880	Sorghum	plastid	31.92	29.79
TraesCS7A01G277900.1	Wheat	plastid	28.66	29.63
Zm00001d025337_P001	Maize	cytosol	32.9	29.28
Os12t0149000-01	Rice	plastid	31.27	29.27
TraesCS7B01G175700.1	Wheat	plastid	28.66	29.14
Zm00001d004919_P001	Maize	plastid	30.62	29.1
KXG26216	Sorghum	cytosol	33.55	27.61
Zm00001d031962_P001	Maize	plastid	26.38	25.63
KRH68709	Soybean	plastid	25.41	25.57
KRH63641	Soybean	cytosol	27.04	25.46
KRH57148	Soybean	cytosol	26.71	25.15
KRH54304	Soybean	cytosol	26.38	24.85
HORVU4Hr1G001870.2	Barley	cytosol	27.69	24.71
KRH16994	Soybean	cytosol	24.43	24.59
KRG96948	Soybean	plastid	24.76	24.36
TraesCS4D01G010300.1	Wheat	cytosol	27.69	24.22
KRG92733	Soybean	plastid	26.06	24.17
TraesCS4B01G012200.1	Wheat	cytosol	27.69	24.08
TraesCS4A01G302100.1	Wheat	cytosol	27.69	24.01
KRH03859	Soybean	cytosol	20.85	23.88
KRH72631	Soybean	cytosol	23.78	23.78
KRH34068	Soybean	plastid	24.76	22.96
KRH52365	Soybean	plastid	24.43	22.52
KRG90008	Soybean	plastid	22.8	22.22
KRH61697	Soybean	plastid	21.82	21.54
KRH05263	Soybean	mitochondrion, plastid	23.78	21.47
KRH15788	Soybean	plastid	23.45	21.05
KRH14191	Soybean	cytosol	19.54	19.29

Protein Annotations

EMBL:ACUP02012146	EnsemblPlants:KRG96144	EnsemblPlantsGene:GLYMA_19G192100	EntrezGene:100785438	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF16	PFAM:PF05910	ProteinID:KRG96144	ProteinID:KRG96144.1	UniParc:UPI000233F5EC	UniProt:I1NAJ7
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:44939709..44941556

Molecular Weight (calculated)

34648.1 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.414

Length

307 amino acids

Sequence
(BLAST)

001: MRSIASCYNE HAIRVSDSYC SRPSNQAYLC PELNPSTRDS VTCMYKLSLI KTQKQLFITI TWAKKLLGQG FTITISNSEH SLSPSNNKSN ARQLRKNKGN
101: ETFQSQNFQV QVLWDLSDAK YEEGPEPVGG FYVDVLVDSE LGLRLGDKNS SMEELLPNFD AKEATFSMVS RSETFSGTAV YATKAKFSQT GSSHDILIRC
201: GAEAERGEPK GHVLSVCVDK KTMFQVKRLR WNFRGNQTIF VDGLVVDMMW DVHDWLFNSN SASSAVFMFR TRSGLDSRLW LEKSLHAHKE QDKIGFSLLI
301: CACKNND

Best Arabidopsis Sequence Match ( AT2G36470.1 )
(BLAST)

001: MRGLAACYSE HAIKVSDTYC SGPSNHSYIS PTLPPSIPDT VTTTYRSNLP SSDKPVSVSL TWSDNLTVVI STPPKSYSVS LRKPKGSRKL TSSSGSLNAE
101: ILWDLSEAEY ENNGPEPIRR FFVVVVVNSE ITLGVGDVDH ERDTSSSSSW RVSKTERFSG TCWLTTKAQF SDVGRKHEIQ IQCGGGGGGG GEEGYLWKVK
201: SPETMSVYVD KRKVFSVKKL KWNFRGNQTM FFDGMLIDMM WDLHDWFYKE TLSSVSTSSS SKTASSSSSS STSSSTPPCA VFMFRRRSGL DSRLWIDEDE
301: QESEMKKNIG SRDEKHSFSL IICASKK

Arabidopsis Description

DUF868 family protein, putative (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SJQ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.