CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92733	Soybean	plastid	90.63	90.63
VIT_14s0030g01700.t01	Wine grape	plastid	67.07	68.1
KRG96948	Soybean	plastid	64.05	67.95
KRH68709	Soybean	plastid	60.42	65.57
PGSC0003DMT400089872	Potato	cytosol, peroxisome, plastid	58.91	56.2
Solyc01g097830.2.1	Tomato	cytosol, nucleus, peroxisome	57.7	55.2
KRH32026	Soybean	cytosol, plastid	30.21	33.33
KRH68710	Soybean	plastid	29.0	32.32
KRG95548	Soybean	cytosol	29.31	32.23
KRH71412	Soybean	cytosol	29.31	32.23
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	28.7	31.56
KRG92651	Soybean	cytosol	28.4	31.33
KRH22720	Soybean	plastid	28.4	31.13
KRG96949	Soybean	cytosol, plastid	28.7	31.05
KRH26585	Soybean	plastid	27.49	30.23
KRH67230	Soybean	cytosol	27.49	29.07
KRH25175	Soybean	cytosol	27.49	28.71
KRH03859	Soybean	cytosol	22.96	28.36
KRH57148	Soybean	cytosol	27.79	28.22
KRH15788	Soybean	plastid	29.0	28.07
KRH05263	Soybean	mitochondrion, plastid	28.7	27.94
KRH52365	Soybean	plastid	28.1	27.93
KRH30504	Soybean	plastid	26.89	27.38
KRH54304	Soybean	cytosol	26.89	27.3
KRH61697	Soybean	plastid	25.38	27.01
KRH63641	Soybean	cytosol	26.28	26.69
KRH67854	Soybean	cytosol	23.87	25.65
KRG96144	Soybean	nucleus	22.96	24.76
KRH16994	Soybean	cytosol	22.36	24.26
KRH72631	Soybean	cytosol	22.05	23.78
KRG90008	Soybean	plastid	22.05	23.17
KRH14191	Soybean	cytosol	21.75	23.15

Protein Annotations

EMBL:ACUP02006573	EnsemblPlants:KRH34068	EnsemblPlantsGene:GLYMA_10G160700	EntrezGene:100777551	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF6	PFAM:PF05910	ProteinID:KRH34068	ProteinID:KRH34068.1	SEG:seg	UniParc:UPI000233CC53
UniProt:I1LBJ8	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:39494523..39495680

Molecular Weight (calculated)

37062.9 Da

IEP (calculated)

7.874

GRAVY (calculated)

-0.236

Length

331 amino acids

Sequence
(BLAST)

001: MIPACFSQPN TPSSSSITQV PQNLVTCIYQ TQLCNSSTYL TLTWCRTLLS HSLTIYAPHT FSITIPLNPS TFSFFRTRPE SKSIYLTRPH KRSQKIKLHW
101: DFSETLFSTR NSAEPESCFY LAICCNGRVE FFLGDLVLGL PVQLSTHQPS DQTLVSRREH VFGSKSYVSR GEFMGSKHEL EIELCSGEEL RVKADGQVCL
201: VVKRLAWKFR GNEKIFIDGV EVEFYWDVLN WVVNSEDGNG NNGHGVFVFQ VGDGGAVWPE MVGPEKKLMK KRLVGPTMAP SIFRTSPSSS SVLQWAEESS
301: DGGRSSCSSS TRSCGSSNGG FSLLLYAWWR D

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.