CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26585	Soybean	plastid	95.03	95.35
VIT_06s0061g01360.t01	Wine grape	plastid	72.19	72.91
KRH25175	Soybean	cytosol	76.16	72.56
KRH30504	Soybean	plastid	75.83	70.46
Solyc06g074500.1.1	Tomato	cytosol	60.26	60.07
PGSC0003DMT400018411	Potato	cytosol	59.6	59.41
AT2G27770.1	Thale cress	plastid	60.26	56.88
CDX77134	Canola	cytosol, plastid	59.6	55.73
Bra034367.1-P	Field mustard	plastid	58.61	54.46
CDY30531	Canola	plastid	58.28	53.66
KRH67854	Soybean	cytosol	52.98	51.95
KRG96144	Soybean	nucleus	52.32	51.47
Solyc11g066930.1.1	Tomato	nucleus, plastid	51.66	48.9
GSMUA_Achr3P03050_001	Banana	nucleus	43.05	44.22
GSMUA_Achr10P...	Banana	nucleus, plastid	42.38	41.97
GSMUA_Achr8P29560_001	Banana	nucleus	40.73	41.69
KRH68710	Soybean	plastid	40.73	41.41
GSMUA_Achr2P20270_001	Banana	cytosol	41.39	40.85
KRG96949	Soybean	cytosol, plastid	41.06	40.52
KRH32026	Soybean	cytosol, plastid	40.07	40.33
GSMUA_Achr11P...	Banana	plastid	38.41	40.0
KRH71412	Soybean	cytosol	39.4	39.53
KRG95548	Soybean	cytosol	39.07	39.2
KRG92651	Soybean	cytosol	38.74	39.0
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	38.08	38.21
GSMUA_Achr8P07610_001	Banana	cytosol	36.09	37.85
KRH67230	Soybean	cytosol	37.75	36.42
TraesCS7D01G277700.1	Wheat	plastid	32.78	32.78
TraesCS7A01G277900.1	Wheat	plastid	32.12	32.66
TraesCS7B01G175700.1	Wheat	plastid	32.12	32.12
Zm00001d052520_P001	Maize	plastid	33.77	31.97
OQU82880	Sorghum	plastid	34.77	31.91
TraesCS5B01G130100.1	Wheat	plastid	33.44	31.86
KXG22966	Sorghum	plastid	34.44	31.8
TraesCS5A01G130200.1	Wheat	plastid	32.78	31.43
HORVU7Hr1G058790.3	Barley	plastid	31.46	31.35
Zm00001d004919_P001	Maize	plastid	33.44	31.27
TraesCS5D01G137700.1	Wheat	plastid	32.78	30.84
Os12t0149000-01	Rice	plastid	33.11	30.49
TraesCS2B01G308700.1	Wheat	cytosol	33.77	30.45
HORVU5Hr1G041450.1	Barley	plastid	32.45	30.43
TraesCS2D01G290200.1	Wheat	cytosol	33.44	30.42
KRH68709	Soybean	plastid	30.46	30.16
Os04t0407500-00	Rice	cytosol, plastid	24.83	30.0
TraesCS4B01G134800.1	Wheat	plastid	31.13	29.75
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	33.77	29.65
TraesCS4A01G183900.1	Wheat	plastid	30.79	29.52
TraesCS2A01G292300.1	Wheat	cytosol	33.11	29.5
KRH03859	Soybean	cytosol	26.16	29.48
KRH57148	Soybean	cytosol	31.79	29.45
KRG96948	Soybean	plastid	30.13	29.17
KRH63641	Soybean	cytosol	31.46	29.14
Zm00001d025337_P001	Maize	cytosol	33.11	28.99
KRH54304	Soybean	cytosol	31.13	28.83
TraesCS4D01G129600.1	Wheat	plastid	30.13	28.62
KRH34068	Soybean	plastid	31.13	28.4
KRG92733	Soybean	plastid	31.13	28.4
Zm00001d031962_P001	Maize	plastid	28.81	27.53
KXG26216	Sorghum	cytosol	33.44	27.08
KRG90008	Soybean	plastid	27.48	26.35
KRH16994	Soybean	cytosol	26.49	26.23
HORVU4Hr1G001870.2	Barley	cytosol	29.8	26.16
KRH52365	Soybean	plastid	28.81	26.13
TraesCS4B01G012200.1	Wheat	cytosol	30.46	26.06
KRH72631	Soybean	cytosol	26.16	25.73
TraesCS4A01G302100.1	Wheat	cytosol	30.13	25.71
TraesCS4D01G010300.1	Wheat	cytosol	29.47	25.36
KRH61697	Soybean	plastid	25.83	25.08
KRH15788	Soybean	plastid	26.82	23.68
KRH05263	Soybean	mitochondrion, plastid	26.16	23.24
KRH14191	Soybean	cytosol	23.51	22.83

Protein Annotations

EMBL:ACUP02008428	EnsemblPlants:KRH22720	EnsemblPlantsGene:GLYMA_13G318700	EntrezGene:100775403	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF10	PFAM:PF05910	ProteinID:KRH22720	ProteinID:KRH22720.1	ProteinID:KRH22721.1	SEG:seg
UniParc:UPI000233E3D0	UniProt:I1MS59	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:41311983..41314947

Molecular Weight (calculated)

33810.2 Da

IEP (calculated)

8.778

GRAVY (calculated)

-0.282

Length

302 amino acids

Sequence
(BLAST)

001: MNMSDIISCF NENAVNVSHS SCSSYSNNAC ISPTSVTPSS QNSVSSVYKT TLSNQKQLLI TVTWCKSHSN QGLTITFGEE NNNPLAPSFR LNTNSRFFRK
101: KKGSKVLESE DSKVEVFWDL SKAKYGTGPE PVEGFYVAIL VDAEIGLALG EDVTKKFKTK TLLGNVSLLS RREHCSGNAV YATKAQFCDT GTRHDILIRC
201: SGENEGLKAP ALSVCIDKKT VIRVKRLQWN FRGNHTIFVD GLLVDLLWDV HNWFFNPASG YAVFMFRTRS GLDSRLWLEE KIAQKDKDRV EFSLLIYACK
301: NT

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.