Factsheet for GSMUA_Achr10P15490_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P03050_001	Banana	nucleus	70.49	73.13
GSMUA_Achr2P20270_001	Banana	cytosol	71.48	71.24
GSMUA_Achr8P29560_001	Banana	nucleus	65.25	67.46
GSMUA_Achr11P...	Banana	plastid	52.46	55.17
GSMUA_Achr8P07610_001	Banana	cytosol	45.9	48.61
VIT_06s0061g01360.t01	Wine grape	plastid	45.57	46.49
Solyc06g074500.1.1	Tomato	cytosol	44.59	44.88
PGSC0003DMT400018411	Potato	cytosol	44.59	44.88
VIT_08s0007g03840.t01	Wine grape	nucleus	42.3	42.86
KRH26585	Soybean	plastid	42.3	42.86
PGSC0003DMT400006889	Potato	nucleus	21.31	42.48
KRH22720	Soybean	plastid	41.97	42.38
KRH67854	Soybean	cytosol	42.62	42.21
KRG96144	Soybean	nucleus	42.3	42.02
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	40.0	41.5
TraesCS2B01G308700.1	Wheat	cytosol	45.25	41.19
KRH25175	Soybean	cytosol	42.62	41.01
TraesCS2D01G290200.1	Wheat	cytosol	44.59	40.96
Zm00001d025337_P001	Maize	cytosol	46.23	40.87
TraesCS5B01G130100.1	Wheat	plastid	42.3	40.69
TraesCS2A01G292300.1	Wheat	cytosol	44.92	40.41
TraesCS5A01G130200.1	Wheat	plastid	41.64	40.32
KRH30504	Soybean	plastid	42.95	40.31
TraesCS5D01G137700.1	Wheat	plastid	41.97	39.88
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	44.92	39.83
Solyc11g066930.1.1	Tomato	nucleus, plastid	41.31	39.5
Os04t0407500-00	Rice	cytosol, plastid	32.13	39.2
HORVU5Hr1G041450.1	Barley	plastid	41.31	39.13
TraesCS7D01G277700.1	Wheat	plastid	38.69	39.07
AT2G27770.1	Thale cress	plastid	40.98	39.06
TraesCS7A01G277900.1	Wheat	plastid	38.03	39.06
Bra034367.1-P	Field mustard	plastid	40.66	38.15
CDX77134	Canola	cytosol, plastid	40.33	38.08
TraesCS7B01G175700.1	Wheat	plastid	37.7	38.08
HORVU7Hr1G058790.3	Barley	plastid	37.7	37.95
KXG26216	Sorghum	cytosol	45.57	37.27
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	31.8	37.16
GSMUA_Achr5P24690_001	Banana	cytosol	35.08	36.9
Os12t0149000-01	Rice	plastid	39.67	36.89
Zm00001d004919_P001	Maize	plastid	39.02	36.84
OQU82880	Sorghum	plastid	39.67	36.78
Zm00001d052520_P001	Maize	plastid	38.36	36.68
CDY30531	Canola	plastid	39.34	36.59
KXG22966	Sorghum	plastid	39.02	36.39
Zm00001d031962_P001	Maize	plastid	37.05	35.76
TraesCS4B01G134800.1	Wheat	plastid	36.72	35.44
TraesCS4A01G183900.1	Wheat	plastid	36.39	35.24
Bra023071.1-P	Field mustard	cytosol	37.05	35.2
CDX84556	Canola	cytosol	37.05	35.2
TraesCS4D01G129600.1	Wheat	plastid	36.39	34.91
CDX79683	Canola	cytosol	36.07	34.7
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	29.51	34.09
AT2G36470.1	Thale cress	nucleus	36.07	33.64
HORVU4Hr1G001870.2	Barley	cytosol	37.7	33.43
TraesCS4D01G010300.1	Wheat	cytosol	36.39	31.62
TraesCS4B01G012200.1	Wheat	cytosol	36.39	31.44
TraesCS4A01G302100.1	Wheat	cytosol	36.39	31.36
GSMUA_AchrUn_...	Banana	plastid	28.2	30.61
GSMUA_AchrUn_...	Banana	cytosol	25.57	27.96
GSMUA_Achr10P...	Banana	cytosol	28.85	27.67
CDY33155	Canola	cytosol	34.1	26.0
GSMUA_Achr3P12010_001	Banana	cytosol	21.97	24.28
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	26.56	21.32
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	26.56	20.82
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	26.23	19.66
GSMUA_Achr3P04550_001	Banana	plastid	16.07	18.42

Protein Annotations

EnsemblPlants:GSMUA_Achr10P15490_001	EnsemblPlants:GSMUA_Achr10T15490_001	EnsemblPlantsGene:GSMUA_Achr10G15490_001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF16
PFAM:PF05910	PFscan:PS51257	SEG:seg	UniParc:UPI00029691FD	UniProt:M0RIH5	MapMan:35.2

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G15490_001]

Coordinates

chr10:+:23409871..23411105

Molecular Weight (calculated)

33704.7 Da

IEP (calculated)

7.418

GRAVY (calculated)

-0.273

Length

305 amino acids

Sequence
(BLAST)

001: MKDFASCFNE HAVKVSNSSC SGSSSSSSSC NSSVVDNTTS ALGAVTCLYR TKLSTPRELL VKVTWSKGNV GPVLSVGIDD NPSIHRSEPD AMNCPLLRKK
101: KGSRSYVSGS YAVGLHWDIA SAKYGSGPEP IDGFYVVIVV NSEFALLLGD MSRDYIRNIE DSLPVAEFSM ISRKEQVVGQ THHSTRARFC DGGIDHEITV
201: RCKGDRCDAK ASELSVSVDK KLVVQVRSLR WNFRGNQTIF IDGSPVDLMW DVHDWWFGSS SGCAAFMFRT RSTSESRLWL EDEMLQREQQ ATPGFSLLIQ
301: AFKNQ

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.