CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96144	Soybean	nucleus	89.94	90.23
VIT_08s0007g03840.t01	Wine grape	nucleus	59.74	61.13
PGSC0003DMT400006889	Potato	nucleus	28.25	56.86
KRH22720	Soybean	plastid	51.95	52.98
KRH26585	Soybean	plastid	51.62	52.82
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	48.7	51.02
KRH25175	Soybean	cytosol	49.68	48.27
KRH30504	Soybean	plastid	50.0	47.38
GSMUA_Achr3P03050_001	Banana	nucleus	43.51	45.58
CDX79683	Canola	cytosol	45.45	44.16
CDX84556	Canola	cytosol	45.78	43.93
Bra023071.1-P	Field mustard	cytosol	45.45	43.61
AT2G36470.1	Thale cress	nucleus	46.1	43.43
GSMUA_Achr8P29560_001	Banana	nucleus	40.91	42.71
GSMUA_Achr10P...	Banana	nucleus, plastid	42.21	42.62
GSMUA_Achr2P20270_001	Banana	cytosol	41.88	42.16
GSMUA_Achr11P...	Banana	plastid	38.64	41.03
KRH68710	Soybean	plastid	37.01	38.38
GSMUA_Achr8P07610_001	Banana	cytosol	35.06	37.5
KRG96949	Soybean	cytosol, plastid	36.36	36.6
KRG92651	Soybean	cytosol	34.09	35.0
CDY33155	Canola	cytosol	44.48	34.25
KRH32026	Soybean	cytosol, plastid	33.12	34.0
KRG95548	Soybean	cytosol	32.79	33.55
KRH71412	Soybean	cytosol	32.79	33.55
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	32.79	33.55
TraesCS5A01G130200.1	Wheat	plastid	33.77	33.02
TraesCS5B01G130100.1	Wheat	plastid	33.77	32.81
TraesCS5D01G137700.1	Wheat	plastid	34.09	32.71
Zm00001d052520_P001	Maize	plastid	33.77	32.6
HORVU5Hr1G041450.1	Barley	plastid	33.77	32.3
TraesCS4B01G134800.1	Wheat	plastid	33.12	32.28
TraesCS4A01G183900.1	Wheat	plastid	32.79	32.06
OQU82880	Sorghum	plastid	34.09	31.91
KXG22966	Sorghum	plastid	33.77	31.8
TraesCS2D01G290200.1	Wheat	cytosol	34.09	31.63
Os04t0407500-00	Rice	cytosol, plastid	25.65	31.6
TraesCS4D01G129600.1	Wheat	plastid	32.47	31.45
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	35.06	31.4
HORVU7Hr1G058790.3	Barley	plastid	30.84	31.35
TraesCS2B01G308700.1	Wheat	cytosol	34.09	31.34
KRH67230	Soybean	cytosol	31.82	31.31
Zm00001d004919_P001	Maize	plastid	32.79	31.27
TraesCS7D01G277700.1	Wheat	plastid	30.19	30.79
TraesCS7A01G277900.1	Wheat	plastid	29.55	30.64
TraesCS2A01G292300.1	Wheat	cytosol	33.44	30.38
Os12t0149000-01	Rice	plastid	32.14	30.18
TraesCS7B01G175700.1	Wheat	plastid	29.55	30.13
Zm00001d025337_P001	Maize	cytosol	32.47	28.99
KXG26216	Sorghum	cytosol	33.77	27.88
Zm00001d031962_P001	Maize	plastid	27.92	27.22
KRH68709	Soybean	plastid	26.62	26.89
KRH63641	Soybean	cytosol	27.92	26.38
KRH57148	Soybean	cytosol	27.6	26.07
KRH54304	Soybean	cytosol	27.27	25.77
KRG92733	Soybean	plastid	27.6	25.68
KRG96948	Soybean	plastid	25.65	25.32
HORVU4Hr1G001870.2	Barley	cytosol	27.92	25.0
TraesCS4B01G012200.1	Wheat	cytosol	28.25	24.65
KRH03859	Soybean	cytosol	21.43	24.63
TraesCS4D01G010300.1	Wheat	cytosol	27.92	24.5
TraesCS4A01G302100.1	Wheat	cytosol	27.92	24.29
KRH16994	Soybean	cytosol	24.03	24.26
KRH34068	Soybean	plastid	25.65	23.87
KRH72631	Soybean	cytosol	23.7	23.78
KRH52365	Soybean	plastid	25.65	23.72
KRH05263	Soybean	mitochondrion, plastid	25.0	22.65
KRH15788	Soybean	plastid	25.0	22.51
KRH61697	Soybean	plastid	22.73	22.51
KRG90008	Soybean	plastid	22.4	21.9
KRH14191	Soybean	cytosol	19.48	19.29

Protein Annotations

EMBL:ACUP02002084	EMBL:BT097886	EnsemblPlants:KRH67854	EnsemblPlantsGene:GLYMA_03G191400	EntrezGene:100815367	InterPro:DUF868_pln
PANTHER:PTHR31972	PANTHER:PTHR31972:SF16	PFAM:PF05910	ProteinID:KRH67853.1	ProteinID:KRH67854	ProteinID:KRH67854.1
UniParc:UPI0001B167DA	UniProt:C6TJN8	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:40224623..40226502

Molecular Weight (calculated)

34574.3 Da

IEP (calculated)

8.280

GRAVY (calculated)

-0.256

Length

308 amino acids

Sequence
(BLAST)

001: MRSIASCYNE HAIRVSDSYC SRPSTQAYLG PKLHPSTRDS VTCMYKLTLI ETQKQLFITL TWSKKLLGQG FTITIANSEH SLSPSKSNAR QLRKIKGNET
101: LQSQNFKVQV LWDLSDAKYE EGPEPVGAFY VVVLVDSELG LRLGDKNSLI EELLSNLDAK EANFSLVSRS ETFSGTAVYA TKAKFSETGI SHEILIKCGA
201: EVVEGGEAKK GHVLSVCVDK KTIFQVKRLR WNFRGNQTIF VDGLVVDMMW DVHDWLFNSN SASSAVFMFR TRSGLDSRLW LEEKSLHAHK EQDKIGFSLL
301: ICACKNND

Best Arabidopsis Sequence Match ( AT2G36470.1 )
(BLAST)

001: MRGLAACYSE HAIKVSDTYC SGPSNHSYIS PTLPPSIPDT VTTTYRSNLP SSDKPVSVSL TWSDNLTVVI STPPKSYSVS LRKPKGSRKL TSSSGSLNAE
101: ILWDLSEAEY ENNGPEPIRR FFVVVVVNSE ITLGVGDVDH ERDTSSSSSW RVSKTERFSG TCWLTTKAQF SDVGRKHEIQ IQCGGGGGGG GEEGYLWKVK
201: SPETMSVYVD KRKVFSVKKL KWNFRGNQTM FFDGMLIDMM WDLHDWFYKE TLSSVSTSSS SKTASSSSSS STSSSTPPCA VFMFRRRSGL DSRLWIDEDE
301: QESEMKKNIG SRDEKHSFSL IICASKK

Arabidopsis Description

DUF868 family protein, putative (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SJQ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.