CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34068	Soybean	plastid	90.63	90.63
VIT_14s0030g01700.t01	Wine grape	plastid	66.47	67.48
KRG96948	Soybean	plastid	62.54	66.35
KRH68709	Soybean	plastid	59.21	64.26
PGSC0003DMT400089872	Potato	cytosol, peroxisome, plastid	58.31	55.62
Solyc01g097830.2.1	Tomato	cytosol, nucleus, peroxisome	57.4	54.91
KRH32026	Soybean	cytosol, plastid	30.82	34.0
KRH71412	Soybean	cytosol	29.91	32.89
KRG95548	Soybean	cytosol	29.91	32.89
KRH68710	Soybean	plastid	29.31	32.66
KRG92651	Soybean	cytosol	29.0	32.0
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	29.0	31.89
KRH22720	Soybean	plastid	28.4	31.13
KRG96949	Soybean	cytosol, plastid	28.7	31.05
KRH15788	Soybean	plastid	31.72	30.7
KRH26585	Soybean	plastid	27.49	30.23
KRH05263	Soybean	mitochondrion, plastid	30.82	30.0
KRH67230	Soybean	cytosol	28.1	29.71
KRH52365	Soybean	plastid	29.61	29.43
KRH25175	Soybean	cytosol	27.49	28.71
KRH03859	Soybean	cytosol	22.66	27.99
KRH61697	Soybean	plastid	26.28	27.97
KRH57148	Soybean	cytosol	27.19	27.61
KRH67854	Soybean	cytosol	25.68	27.6
KRH30504	Soybean	plastid	26.89	27.38
KRH54304	Soybean	cytosol	26.59	26.99
KRH63641	Soybean	cytosol	25.98	26.38
KRG96144	Soybean	nucleus	24.17	26.06
KRH16994	Soybean	cytosol	22.66	24.59
KRH72631	Soybean	cytosol	22.66	24.43
KRG90008	Soybean	plastid	22.66	23.81
KRH14191	Soybean	cytosol	21.75	23.15

Protein Annotations

EMBL:ACUP02012766	EnsemblPlants:KRG92733	EnsemblPlantsGene:GLYMA_20G227700	EntrezGene:100815054	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF6	PFAM:PF05910	ProteinID:KRG92733	ProteinID:KRG92733.1	SEG:seg	UniParc:UPI000233DD64
UniProt:I1NIT3	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:46220425..46221852

Molecular Weight (calculated)

37022.9 Da

IEP (calculated)

8.393

GRAVY (calculated)

-0.250

Length

331 amino acids

Sequence
(BLAST)

001: MIPACFSQPN TPSSSSTTQV PQNLVTCIYQ TQLCNSSTHL TLTWSRTLLS HSLTIYAPHT FSITIPLNPS TFSFFRTRPG SKSIYLTRPN KRSQKIKLHW
101: DFSEAIFSTR NSAEPESRFY LAVCCNGRVE FFLGDLVLVL PMQLSPHQPS DQALVSRREH VFGSTSYESR GEFVGSKREI EIELFSGEEL RVKVDGQVCL
201: VVKRLTWKFR GNEKIFIDGV EVEFFWDVLN WVFNSENGNG NNGYGVFVFQ VGDGGAVWPE MVGPEKKLMK KRLVGPTMVP SVVTTSPSSS SVLQWTEESS
301: DGGRSSCSSS TRSCGSSNGG FSLLLYAWRR D

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.