CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57148	Soybean	cytosol	91.79	75.46
KRH54304	Soybean	cytosol	78.36	64.42
VIT_17s0000g09400.t01	Wine grape	cytosol	78.36	63.83
KRH63641	Soybean	cytosol	77.61	63.8
PGSC0003DMT400046694	Potato	cytosol	74.25	62.38
Solyc03g112130.1.1	Tomato	cytosol	73.51	61.95
GSMUA_AchrUn_...	Banana	plastid	54.85	52.31
GSMUA_Achr10P...	Banana	cytosol	52.99	44.65
Zm00001d042425_P001	Maize	plastid	51.49	44.37
HORVU3Hr1G092470.1	Barley	plastid	50.37	42.86
TraesCS3A01G415900.1	Wheat	plastid	50.75	42.77
TraesCS3B01G451100.1	Wheat	plastid	50.37	42.19
EES04078	Sorghum	plastid	50.75	41.98
TraesCS3D01G411600.1	Wheat	plastid	50.37	41.67
Os01t0909400-01	Rice	cytosol, plastid	49.25	40.62
KRH72631	Soybean	cytosol	43.28	37.78
KRH16994	Soybean	cytosol	42.16	37.05
Os05t0108400-01	Rice	cytosol	39.93	34.97
KRH68710	Soybean	plastid	38.06	34.34
KRH32026	Soybean	cytosol, plastid	38.43	34.33
KRG90008	Soybean	plastid	39.55	33.65
Zm00001d035694_P001	Maize	cytosol	37.69	33.22
KRH71412	Soybean	cytosol	37.31	33.22
KRG96949	Soybean	cytosol, plastid	37.31	32.68
TraesCS1A01G026000.1	Wheat	cytosol	36.94	32.57
TraesCS1D01G026300.1	Wheat	cytosol	36.94	32.57
TraesCS1B01G032400.1	Wheat	cytosol	36.94	32.46
KRG92651	Soybean	cytosol	35.82	32.0
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	35.82	31.89
KRG95548	Soybean	cytosol	35.82	31.89
KRH67230	Soybean	cytosol	36.19	30.99
KRH14191	Soybean	cytosol	35.82	30.87
KRH26585	Soybean	plastid	29.85	26.58
KXG21057	Sorghum	mitochondrion	37.69	26.37
KRH22720	Soybean	plastid	29.48	26.16
KRH25175	Soybean	cytosol	28.73	24.29
KRH34068	Soybean	plastid	28.36	22.96
KRH68709	Soybean	plastid	26.12	22.95
KRH30504	Soybean	plastid	27.61	22.77
KRG92733	Soybean	plastid	27.99	22.66
KRG96948	Soybean	plastid	26.12	22.44
KRH67854	Soybean	cytosol	24.63	21.43
KRG96144	Soybean	nucleus	23.88	20.85
KRH52365	Soybean	plastid	25.37	20.42
KRH61697	Soybean	plastid	21.27	18.33
KRH05263	Soybean	mitochondrion, plastid	23.13	18.24
KRH15788	Soybean	plastid	22.39	17.54

Protein Annotations

EMBL:ACUP02010364	EnsemblPlants:KRH03859	EnsemblPlantsGene:GLYMA_17G124600	EntrezGene:100802860	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF12	PFAM:PF05910	ProteinID:KRH03859	ProteinID:KRH03859.1	UniParc:UPI000296CC4A	UniProt:I1MUJ4
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:9943457..9945443

Molecular Weight (calculated)

30679.8 Da

IEP (calculated)

8.820

GRAVY (calculated)

-0.500

Length

268 amino acids

Sequence
(BLAST)

001: MMQDSIGIPA CFSSSAEKQH SHHDHDHGAV TRSGQSVYMS VYRTKVADHC RLITITWCKN LLLHGLSVSV EGPEGEEQYY TCKVELKPWY FWRKQGSKRF
101: IVDGKAVDIF WDLKAAKFNG ETEPTSEYYV AVVCDEEVVL LLGDLKKEAY RRTGCRPALI DPILVSKKEH IFGKKKFSTR AKFHEKGRWH EISIECKNKG
201: NNNYNVDSLN GVQPEMEIRI DGHLVIHVKH LQWKFRGNES IHLSKMRVEI EIGFGLRKQV GPNSGFGS

Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)

001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.