CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
golgi 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035694_P001	Maize	cytosol	73.63	92.76
Os05t0108400-01	Rice	cytosol	64.75	81.05
TraesCS1D01G026300.1	Wheat	cytosol	58.75	74.01
TraesCS1B01G032400.1	Wheat	cytosol	58.49	73.44
TraesCS1A01G026000.1	Wheat	cytosol	58.22	73.36
GSMUA_AchrUn_...	Banana	plastid	33.16	45.2
VIT_01s0137g00740.t01	Wine grape	cytosol	33.16	42.33
PGSC0003DMT400046694	Potato	cytosol	33.42	40.13
EES04078	Sorghum	plastid	33.94	40.12
VIT_17s0000g09400.t01	Wine grape	cytosol	34.46	40.12
Solyc03g112130.1.1	Tomato	cytosol	33.16	39.94
KRH57148	Soybean	cytosol	33.68	39.57
KRH63641	Soybean	cytosol	33.42	39.26
KRH54304	Soybean	cytosol	33.16	38.96
KRH03859	Soybean	cytosol	26.37	37.69
OQU84582	Sorghum	cytosol	30.03	35.83
EER93250	Sorghum	cytosol, plastid	24.28	31.96
OQU90135	Sorghum	plastid	27.68	31.18
EER87970	Sorghum	plastid	21.15	22.56
KXG22966	Sorghum	plastid	18.8	22.02
OQU82880	Sorghum	plastid	18.8	21.88
KXG26216	Sorghum	cytosol	20.63	21.18
EES13906	Sorghum	plastid	22.98	21.05
KXG35635	Sorghum	plastid	23.5	20.18

Protein Annotations

EnsemblPlants:KXG21057	EnsemblPlantsGene:SORBI_3009G008300	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF9	PFAM:PF05910
ProteinID:KXG21057	ProteinID:KXG21057.1	SEG:seg	UniParc:UPI00081AB51A	UniProt:A0A1B6P5R7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr9:+:785332..788235

Molecular Weight (calculated)

41316.4 Da

IEP (calculated)

8.655

GRAVY (calculated)

0.001

Length

383 amino acids

Sequence
(BLAST)

001: MHACMFFPRP SRSLLSRRLS NQPATRSSSS LYKHLLFLPC AFLSLSLLSL SLLHEAVDAV AVHIAMLDHH VSSYTHRSGG GGDQPTAAPS PCDLAAVDDV
101: AGNGSHKPGK AVTASVYRAK IAGHSRVVTV SWSRDLLSHA FSVAISGADG ASAECRVELR PWQFWRRAGS RRVELCGGAS TAPAPVRVLW DLRRARFGAG
201: VPEPRCGYFV ALEAAGEVVL VQGDMRRDAL RRAAPCPAAE AEAVPVARRE HVFGRRRFVA KARFHDQGDV HDIAIECGGG GEGGDADVEM TIAIDGEEAV
301: QVKHLQWKFR GNQSLTFSRA KVEVFWDVHD WLFSAGTRPA LFIFRPIVLS SASAPAGMAA GMLDGTVAAT TGFCLYLYAW KLD

Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)

001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE

Arabidopsis Description

At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.