Factsheet for TraesCS1D01G026300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G032400.1	Wheat	cytosol	99.34	99.02
TraesCS1A01G026000.1	Wheat	cytosol	98.68	98.68
Os05t0108400-01	Rice	cytosol	74.67	74.18
Zm00001d035694_P001	Maize	cytosol	71.71	71.71
KXG21057	Sorghum	mitochondrion	74.01	58.75
GSMUA_AchrUn_...	Banana	plastid	43.42	46.98
VIT_01s0137g00740.t01	Wine grape	cytosol	41.45	42.0
Solyc03g112130.1.1	Tomato	cytosol	42.11	40.25
PGSC0003DMT400046694	Potato	cytosol	42.11	40.13
KRH57148	Soybean	cytosol	42.43	39.57
VIT_17s0000g09400.t01	Wine grape	cytosol	42.43	39.21
TraesCS3D01G411600.1	Wheat	plastid	41.45	38.89
KRH63641	Soybean	cytosol	41.45	38.65
KRH54304	Soybean	cytosol	40.79	38.04
KRH03859	Soybean	cytosol	32.57	36.94
TraesCS2D01G204300.1	Wheat	plastid	30.92	33.22
TraesCS6D01G150500.1	Wheat	nucleus	32.89	31.95
TraesCS5D01G467300.1	Wheat	cytosol, plastid	31.25	30.84
TraesCS7D01G277700.1	Wheat	plastid	27.96	28.15
TraesCS4D01G129600.1	Wheat	plastid	25.33	24.21
TraesCS4D01G010300.1	Wheat	cytosol	26.64	23.08
TraesCS2D01G290200.1	Wheat	cytosol	25.0	22.89
TraesCS5D01G137700.1	Wheat	plastid	23.68	22.43
TraesCS5D01G233300.1	Wheat	plastid	28.62	21.01
TraesCS7D01G147500.1	Wheat	plastid	26.32	20.36

Protein Annotations

EnsemblPlants:TraesCS1D01G026300.1	EnsemblPlantsGene:TraesCS1D01G026300	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF9	PFAM:PF05910
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:10722698..10723612

Molecular Weight (calculated)

32527.8 Da

IEP (calculated)

9.977

GRAVY (calculated)

-0.044

Length

304 amino acids

Sequence
(BLAST)

001: MHTQRVSGEQ AGPALPCEIA ADDMPAARNG HYRPGKAVTA SVYRAKVAGH SRVVTVSWSR DLLSHAFAVA ISGADGASAE CRVDLRPWQF WRRAGSRRVE
101: LGGATVRVLW DLRRARWHGA GAGLPDPRGG YYVAVEAGGE VALVLGDLRK AALRRASPSA PPALAAVPVA RREHVFGRRR FAAKARFHDQ GAVHDVAIDV
201: GGEDDMEMAI AIDGEEAVAV KHLQWKFRGN QSVTFGRAKV EVYWDVHDWL FAGAAGGARP ALFIFRPIVL SSASVGASTP LLAGVDGAAG ATGFCLYLYA
301: WKLD

Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)

001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.