Factsheet for Solyc03g112130.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046694	Potato	cytosol	99.37	99.06
VIT_17s0000g09400.t01	Wine grape	cytosol	79.56	76.9
KRH57148	Soybean	cytosol	77.04	75.15
KRH03859	Soybean	cytosol	61.95	73.51
KRH54304	Soybean	cytosol	74.21	72.39
KRH63641	Soybean	cytosol	74.21	72.39
GSMUA_AchrUn_...	Banana	plastid	53.77	60.85
GSMUA_Achr10P...	Banana	cytosol	55.97	55.97
Zm00001d042425_P001	Maize	plastid	53.46	54.66
HORVU3Hr1G092470.1	Barley	plastid	52.52	53.02
TraesCS3A01G415900.1	Wheat	plastid	51.89	51.89
TraesCS3B01G451100.1	Wheat	plastid	52.2	51.88
EES04078	Sorghum	plastid	52.52	51.54
TraesCS3D01G411600.1	Wheat	plastid	52.2	51.23
Os01t0909400-01	Rice	cytosol, plastid	51.57	50.46
Solyc12g044670.1.1	Tomato	plastid	44.03	45.45
Os05t0108400-01	Rice	cytosol	41.2	42.81
TraesCS1A01G026000.1	Wheat	cytosol	40.25	42.11
TraesCS1D01G026300.1	Wheat	cytosol	40.25	42.11
TraesCS1B01G032400.1	Wheat	cytosol	40.25	41.97
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	41.51	41.51
Zm00001d035694_P001	Maize	cytosol	38.05	39.8
Solyc01g097790.2.1	Tomato	cytosol	37.42	39.8
Solyc09g075960.1.1	Tomato	nucleus, peroxisome, plasma membrane	35.22	36.96
Solyc12g015900.1.1	Tomato	cytosol	33.65	35.91
KXG21057	Sorghum	mitochondrion	39.94	33.16
Solyc06g074500.1.1	Tomato	cytosol	29.87	31.35
Solyc08g028780.1.1	Tomato	mitochondrion	31.13	29.2
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	25.79	27.89
Solyc11g066930.1.1	Tomato	nucleus, plastid	27.36	27.27
Solyc01g097830.2.1	Tomato	cytosol, nucleus, peroxisome	28.3	26.01

Protein Annotations

EnsemblPlants:Solyc03g112130.1.1	EnsemblPlantsGene:Solyc03g112130.1	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF12	PFAM:PF05910
SEG:seg	UniParc:UPI00027692F4	UniProt:K4BK67	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3:-:62630126..62631082

Molecular Weight (calculated)

35906.9 Da

IEP (calculated)

8.218

GRAVY (calculated)

-0.244

Length

318 amino acids

Sequence
(BLAST)

001: MQDSIPACFS AGEKLSDDHA AVTRSGQSIF MSVYRTKIAD QCRLITVTWC KNLLLHGLSV SVDGSSGDGQ YTCKVELKPW YFWRKQGSKH FLVDSKPVDI
101: FWDLKAAKFN GETEPSSEYY VAVVCDEEVI LLLGDLKKDA YRKTGCRPAL IEPILVSRKE HVFGKKKFLT RVKFHDKGRM HEISIECKNR INSSGISIDG
201: VDPEMEIRID GKLFIHVKHL QWKFRGNESI HLNKVRIEVY WDVHDWIFNP GLRHALFIFK PVLLSTSPSS VSELSSPPFS SSTSTPLSSQ TGSSGSIEGL
301: NSNSSSDFCL FLYAWKVE

Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)

001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE

Arabidopsis Description

At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.