Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076600 | Potato | cytosol | 92.62 | 92.62 |
| Solyc12g044670.1.1 | Tomato | plastid | 45.64 | 44.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.6 | 42.29 |
| AT3G13229.1 | Thale cress | cytosol | 40.94 | 42.21 |
| Solyc03g121220.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 44.97 | 42.14 |
| CDY66553 | Canola | cytosol | 39.6 | 41.84 |
| KRH14191 | Soybean | cytosol | 43.62 | 41.8 |
| Bra001495.1-P | Field mustard | cytosol | 40.27 | 41.24 |
| CDX82547 | Canola | cytosol | 40.27 | 41.24 |
| Zm00001d015796_P001 | Maize | cytosol | 26.51 | 41.15 |
| GSMUA_Achr3P12010_001 | Banana | cytosol | 35.91 | 38.77 |
| Zm00001d053654_P001 | Maize | plastid | 36.58 | 36.82 |
| TraesCS6B01G189500.1 | Wheat | cytosol | 36.91 | 35.26 |
| TraesCS6D01G150500.1 | Wheat | nucleus | 36.91 | 35.14 |
| OQU84582 | Sorghum | cytosol | 37.58 | 34.89 |
| TraesCS6A01G161700.1 | Wheat | cytosol | 36.58 | 34.82 |
| Solyc01g097790.2.1 | Tomato | cytosol | 34.23 | 34.11 |
| HORVU6Hr1G032720.1 | Barley | cytosol | 35.57 | 33.65 |
| Solyc03g112130.1.1 | Tomato | cytosol | 35.91 | 33.65 |
| Solyc09g075960.1.1 | Tomato | nucleus, peroxisome, plasma membrane | 32.21 | 31.68 |
| Os02t0198800-01 | Rice | cytosol, nucleus | 35.23 | 28.23 |
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 23.49 | 23.81 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 24.5 | 22.88 |
| Solyc06g074500.1.1 | Tomato | cytosol | 22.82 | 22.44 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 25.5 | 22.42 |
| Solyc01g097830.2.1 | Tomato | cytosol, nucleus, peroxisome | 23.83 | 20.52 |
Protein Annotations
| EnsemblPlants:Solyc12g015900.1.1 | EnsemblPlantsGene:Solyc12g015900.1 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF2 | PFAM:PF05910 |
| UniParc:UPI000276AAF3 | UniProt:K4DD25 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr12:-:5884905..5885801
Molecular Weight (calculated)
34427.8 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.485
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKSSLESEA SMNQKQLEDE KQTEETIVNK FGEDFTTCIY VAKIAHIFHA ITTTWSKNMT SHTLDIIVEH LSEERHFTCK IDLKSWQFWG KKGLKSFRVG
101: EKRTDIYWDL RSAKFSTRPE PVSDYYVALV SEGDMVLLIG DQNKEAFKRT KSLPAMLDAS LLHKKETIYA KKCFCTRTML GQGKKQHDIT IESVLSGPSD
201: PAMQISVNGT VAIRIANLHW RFRGNEKVFL DNVPVEIFWD VHDWLYSGPN YGPGSFIFKQ GKLEERYSDS ETNINDENCD LQSPCTEFCH FLYAWKTE
101: EKRTDIYWDL RSAKFSTRPE PVSDYYVALV SEGDMVLLIG DQNKEAFKRT KSLPAMLDAS LLHKKETIYA KKCFCTRTML GQGKKQHDIT IESVLSGPSD
201: PAMQISVNGT VAIRIANLHW RFRGNEKVFL DNVPVEIFWD VHDWLYSGPN YGPGSFIFKQ GKLEERYSDS ETNINDENCD LQSPCTEFCH FLYAWKTE
001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
Arabidopsis Description
DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.