Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- golgi 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 68.84 | 68.1 |
| AT4G12690.2 | Thale cress | nucleus | 52.54 | 50.88 |
| VIT_12s0057g01390.t01 | Wine grape | mitochondrion | 55.8 | 49.36 |
| CDY27882 | Canola | nucleus | 51.09 | 48.45 |
| CDY00849 | Canola | nucleus | 51.09 | 48.45 |
| Solyc12g044670.1.1 | Tomato | plastid | 52.54 | 47.08 |
| PGSC0003DMT400069001 | Potato | plastid | 52.17 | 46.75 |
| Bra015139.1-P | Field mustard | nucleus | 51.09 | 46.69 |
| AT2G04220.1 | Thale cress | cytosol | 51.81 | 46.58 |
| PGSC0003DMT400006698 | Potato | mitochondrion | 51.09 | 45.78 |
| Solyc03g121220.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 51.09 | 44.34 |
| KRH72631 | Soybean | cytosol | 49.28 | 44.3 |
| KRH16994 | Soybean | cytosol | 48.91 | 44.26 |
| CDX86317 | Canola | plastid | 48.19 | 43.32 |
| CDY00069 | Canola | plastid | 47.1 | 42.21 |
| CDY48744 | Canola | mitochondrion, plastid | 46.38 | 42.11 |
| CDY19961 | Canola | plastid | 46.38 | 41.83 |
| CDY05690 | Canola | mitochondrion, plastid | 45.29 | 41.67 |
| CDX85324 | Canola | plastid | 41.67 | 41.37 |
| Bra037498.1-P | Field mustard | plastid | 48.19 | 41.18 |
| Zm00001d015796_P001 | Maize | cytosol | 28.62 | 41.15 |
| GSMUA_AchrUn_... | Banana | plastid | 41.67 | 40.93 |
| Bra036180.1-P | Field mustard | plastid | 47.46 | 40.68 |
| Zm00001d053654_P001 | Maize | plastid | 43.48 | 40.54 |
| Bra020708.1-P | Field mustard | mitochondrion | 47.1 | 40.37 |
| AT5G48270.1 | Thale cress | plastid | 46.38 | 39.75 |
| KRG90008 | Soybean | plastid | 45.29 | 39.68 |
| OQU84582 | Sorghum | cytosol | 44.93 | 38.63 |
| TraesCS6D01G150500.1 | Wheat | nucleus | 42.03 | 37.06 |
| KRH14191 | Soybean | cytosol | 41.67 | 36.98 |
| PGSC0003DMT400076600 | Potato | cytosol | 39.86 | 36.91 |
| TraesCS6B01G189500.1 | Wheat | cytosol | 41.67 | 36.86 |
| TraesCS6A01G161700.1 | Wheat | cytosol | 41.67 | 36.74 |
| Solyc12g015900.1.1 | Tomato | cytosol | 38.77 | 35.91 |
| HORVU6Hr1G032720.1 | Barley | cytosol | 40.94 | 35.87 |
| GSMUA_Achr10P... | Banana | cytosol | 41.3 | 35.85 |
| GSMUA_Achr5P24690_001 | Banana | cytosol | 36.23 | 34.48 |
| GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 32.97 | 34.47 |
| AT3G13229.1 | Thale cress | cytosol | 34.42 | 32.87 |
| GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 30.43 | 32.18 |
| CDY66553 | Canola | cytosol | 32.61 | 31.91 |
| Bra001495.1-P | Field mustard | cytosol | 32.61 | 30.93 |
| CDX82547 | Canola | cytosol | 32.61 | 30.93 |
| Os02t0198800-01 | Rice | cytosol, nucleus | 41.3 | 30.65 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 25.36 | 23.73 |
| GSMUA_Achr11P... | Banana | plastid | 23.19 | 22.07 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 24.28 | 21.97 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 23.19 | 21.77 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 22.46 | 21.53 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 22.83 | 20.59 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 22.1 | 16.05 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 22.46 | 15.23 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 20.29 | 14.4 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 10.87 | 11.28 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P12010_001 | EnsemblPlants:GSMUA_Achr3T12010_001 | EnsemblPlantsGene:GSMUA_Achr3G12010_001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF2 |
| PFAM:PF05910 | SEG:seg | UniParc:UPI000296E611 | UniProt:M0SDW8 | MapMan:35.2 | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G12010_001]
Coordinates
chr3:+:8911244..8912140
Molecular Weight (calculated)
30697.5 Da
IEP (calculated)
8.581
GRAVY (calculated)
-0.400
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPAATAHR DPAEEPTPQC SVISIYRAMV GGVPRNVTVV WTKNLMNHSL SVSIDKSNGE SPLTCKVDLK PWPFWSKLKG SKSFDDDSER LDVFWNLRSA
101: KFSDGPEPLE NYYVALVCGE EVVMLLGDLK KKAYRKTRSR PSLEDVTLLS KKENVFGKKC FSSRVKFDDR KKEHDIIVVN SISGHKDPEM WISIDGIVPV
201: QVFWDVHGWL FRGPGSGHAL FIFKPGLPAS AAAGNRGSSG KPTSSRRNNS ESSLVSSCGG GGSQEFCFFL YAWRMD
101: KFSDGPEPLE NYYVALVCGE EVVMLLGDLK KKAYRKTRSR PSLEDVTLLS KKENVFGKKC FSSRVKFDDR KKEHDIIVVN SISGHKDPEM WISIDGIVPV
201: QVFWDVHGWL FRGPGSGHAL FIFKPGLPAS AAAGNRGSSG KPTSSRRNNS ESSLVSSCGG GGSQEFCFFL YAWRMD
001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
Arabidopsis Description
DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.