Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053654_P001 | Maize | plastid | 85.94 | 55.74 |
| TraesCS6B01G189500.1 | Wheat | cytosol | 62.5 | 38.46 |
| HORVU6Hr1G032720.1 | Barley | cytosol | 63.02 | 38.41 |
| TraesCS6A01G161700.1 | Wheat | cytosol | 62.5 | 38.34 |
| TraesCS6D01G150500.1 | Wheat | nucleus | 62.5 | 38.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.65 | 36.92 |
| Os02t0198800-01 | Rice | cytosol, nucleus | 66.67 | 34.41 |
| AT4G12690.2 | Thale cress | nucleus | 49.48 | 33.33 |
| CDY00849 | Canola | nucleus | 48.44 | 31.96 |
| CDY27882 | Canola | nucleus | 48.44 | 31.96 |
| VIT_12s0057g01390.t01 | Wine grape | mitochondrion | 51.56 | 31.73 |
| KRH72631 | Soybean | cytosol | 50.52 | 31.6 |
| Solyc12g044670.1.1 | Tomato | plastid | 50.0 | 31.17 |
| PGSC0003DMT400069001 | Potato | plastid | 50.0 | 31.17 |
| Bra015139.1-P | Field mustard | nucleus | 48.96 | 31.13 |
| KRH16994 | Soybean | cytosol | 48.96 | 30.82 |
| AT2G04220.1 | Thale cress | cytosol | 48.96 | 30.62 |
| CDX85324 | Canola | plastid | 43.75 | 30.22 |
| PGSC0003DMT400006698 | Potato | mitochondrion | 48.44 | 30.19 |
| Solyc03g121220.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 48.44 | 29.25 |
| GSMUA_Achr3P12010_001 | Banana | cytosol | 41.15 | 28.62 |
| CDY48744 | Canola | mitochondrion, plastid | 45.31 | 28.62 |
| KRG90008 | Soybean | plastid | 46.88 | 28.57 |
| CDX86317 | Canola | plastid | 45.31 | 28.34 |
| AT5G48270.1 | Thale cress | plastid | 47.4 | 28.26 |
| CDY05690 | Canola | mitochondrion, plastid | 43.75 | 28.0 |
| CDY00069 | Canola | plastid | 44.27 | 27.6 |
| Bra037498.1-P | Field mustard | plastid | 46.35 | 27.55 |
| PGSC0003DMT400076600 | Potato | cytosol | 42.71 | 27.52 |
| CDY19961 | Canola | plastid | 43.75 | 27.45 |
| Bra020708.1-P | Field mustard | mitochondrion | 45.31 | 27.02 |
| Zm00001d042425_P001 | Maize | plastid | 43.75 | 27.01 |
| KRH14191 | Soybean | cytosol | 43.75 | 27.01 |
| Bra036180.1-P | Field mustard | plastid | 44.79 | 26.71 |
| Solyc12g015900.1.1 | Tomato | cytosol | 41.15 | 26.51 |
| Zm00001d013042_P001 | Maize | plastid | 39.58 | 26.12 |
| Zm00001d021869_P001 | Maize | plastid | 38.02 | 25.7 |
| Zm00001d035694_P001 | Maize | cytosol | 40.62 | 25.66 |
| CDY66553 | Canola | cytosol | 37.5 | 25.53 |
| AT3G13229.1 | Thale cress | cytosol | 38.02 | 25.26 |
| Bra001495.1-P | Field mustard | cytosol | 37.5 | 24.74 |
| CDX82547 | Canola | cytosol | 37.5 | 24.74 |
| Zm00001d034527_P001 | Maize | plastid | 36.98 | 24.15 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 33.85 | 18.9 |
| Zm00001d004919_P001 | Maize | plastid | 30.73 | 18.27 |
| Zm00001d052520_P001 | Maize | plastid | 29.69 | 17.87 |
| Zm00001d025337_P001 | Maize | cytosol | 31.77 | 17.68 |
| Zm00001d050436_P001 | Maize | plastid | 34.9 | 16.42 |
| Zm00001d032164_P001 | Maize | plastid | 33.33 | 15.84 |
| Zm00001d031962_P001 | Maize | plastid | 26.04 | 15.82 |
| Zm00001d005752_P001 | Maize | plastid | 33.33 | 15.2 |
| Zm00001d020470_P001 | Maize | plastid | 32.81 | 14.96 |
| Zm00001d045119_P001 | Maize | plastid | 26.04 | 14.24 |
| Zm00001d037575_P001 | Maize | cytosol | 14.06 | 11.2 |
Protein Annotations
| EnsemblPlants:Zm00001d015796_P001 | EnsemblPlants:Zm00001d015796_T001 | EnsemblPlantsGene:Zm00001d015796 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF2 |
| PFAM:PF05910 | ProteinID:AQK69552.1 | UniParc:UPI0008425183 | UniProt:A0A1D6H3Z9 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5:-:120808410..120808988
Molecular Weight (calculated)
21149.2 Da
IEP (calculated)
5.752
GRAVY (calculated)
-0.062
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MFWDLRSAKF AAGSGAEPAG GYYIALVSND EVVLLLGDGM KDACKRTKSR ASLEDAVLVC RRESVFGGRS FAARARLVAK RSKEHEIVID CTLAAAGSSR
101: YPEMWITVDG FVLLHVKSLQ WKFRGNETLL VDQAPVQVIW DVHDWLFAGP GAQAVFVFKP GAPPEIKEDS GGNSIEDDGT DFCFFLQARR ME
101: YPEMWITVDG FVLLHVKSLQ WKFRGNETLL VDQAPVQVIW DVHDWLFAGP GAQAVFVFKP GAPPEIKEDS GGNSIEDDGT DFCFFLQARR ME
001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE
Arabidopsis Description
At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.