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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • mitochondrion 3
  • plastid 2
  • peroxisome 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400006698 Potato mitochondrion 96.23 99.35
Solyc12g044670.1.1 Tomato plastid 80.82 83.44
CDY27882 Canola nucleus 61.95 67.7
CDY00849 Canola nucleus 61.95 67.7
Bra015139.1-P Field mustard nucleus 63.21 66.56
KRH16994 Soybean cytosol 63.21 65.9
AT4G12690.2 Thale cress nucleus 58.8 65.61
AT2G04220.1 Thale cress cytosol 62.26 64.5
VIT_12s0057g01390.t01 Wine grape mitochondrion 62.89 64.1
KRH72631 Soybean cytosol 61.32 63.52
KRG90008 Soybean plastid 55.66 56.19
GSMUA_AchrUn_... Banana cytosol 47.17 53.76
CDX86317 Canola plastid 50.94 52.77
CDY05690 Canola mitochondrion, plastid 49.69 52.67
CDY48744 Canola mitochondrion, plastid 49.69 51.97
CDX85324 Canola plastid 44.97 51.44
GSMUA_Achr3P12010_001 Banana cytosol 44.34 51.09
Bra037498.1-P Field mustard plastid 51.89 51.08
AT5G48270.1 Thale cress plastid 51.26 50.62
Bra020708.1-P Field mustard mitochondrion 51.26 50.62
CDY00069 Canola plastid 48.43 50.0
Bra036180.1-P Field mustard plastid 49.69 49.07
CDY19961 Canola plastid 47.17 49.02
Zm00001d015796_P001 Maize cytosol 29.25 48.44
Solyc12g015900.1.1 Tomato cytosol 42.14 44.97
Zm00001d053654_P001 Maize plastid 41.51 44.59
TraesCS6B01G189500.1 Wheat cytosol 42.14 42.95
OQU84582 Sorghum cytosol 43.08 42.68
HORVU6Hr1G032720.1 Barley cytosol 42.14 42.54
TraesCS6A01G161700.1 Wheat cytosol 41.2 41.85
TraesCS6D01G150500.1 Wheat nucleus 41.2 41.85
Solyc03g112130.1.1 Tomato cytosol 41.51 41.51
Solyc01g097790.2.1 Tomato cytosol 38.36 40.8
Os02t0198800-01 Rice cytosol, nucleus 40.57 34.68
Solyc09g075960.1.1 Tomato nucleus, peroxisome, plasma membrane 32.7 34.32
Solyc09g009280.1.1 Tomato cytosol, peroxisome, plastid 24.21 26.19
Solyc08g028780.1.1 Tomato mitochondrion 27.36 25.66
Solyc11g066930.1.1 Tomato nucleus, plastid 24.21 24.14
Solyc06g074500.1.1 Tomato cytosol 22.96 24.09
Solyc01g097830.2.1 Tomato cytosol, nucleus, peroxisome 25.79 23.7
Protein Annotations
EnsemblPlants:Solyc03g121220.2.1EnsemblPlantsGene:Solyc03g121220.2InterPro:DUF868_plnPANTHER:PTHR31972PANTHER:PTHR31972:SF2PFAM:PF05910
SEG:segUniParc:UPI000276713BUniProt:K4BMS1MapMan:35.2::
Description
No Description!
Coordinates
chr3:+:69377290..69378623
Molecular Weight (calculated)
36476.3 Da
IEP (calculated)
8.462
GRAVY (calculated)
-0.479
Length
318 amino acids
Sequence
(BLAST)
001: MRPESLSSLK MPHRVTARAK SFSSQPSIAQ KLKDDPVDPK NAQGSVTCVY QSHIGGYWRN VTVIWRKNMM NHCLTISVDS VENEDHQTCK IDLKPWHFWA
101: KKGYKTFEVD GYQLEAYWDL RSAKFSGSPE PFKDFYVALI AEEEVVLLLG DYKKKAYKRT KSRPALVDAL LFYKKEHVFG KKSFSTRAKF ENNKKESDIV
201: VESSTSGPRD PEMWISIDGI VLIHIKNLQW KFRGNQTVLV NEQHVQVFWD VHSWLFCEPG STHGLFIFKP GVSELESDRD GSSVGGDSDC SDHTKYFSTL
301: SHSRASPFCL FLCAWKIE
Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)
001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
Arabidopsis Description
DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.