Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 2
- peroxisome 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400006698 | Potato | mitochondrion | 96.23 | 99.35 |
Solyc12g044670.1.1 | Tomato | plastid | 80.82 | 83.44 |
CDY27882 | Canola | nucleus | 61.95 | 67.7 |
CDY00849 | Canola | nucleus | 61.95 | 67.7 |
Bra015139.1-P | Field mustard | nucleus | 63.21 | 66.56 |
KRH16994 | Soybean | cytosol | 63.21 | 65.9 |
AT4G12690.2 | Thale cress | nucleus | 58.8 | 65.61 |
AT2G04220.1 | Thale cress | cytosol | 62.26 | 64.5 |
VIT_12s0057g01390.t01 | Wine grape | mitochondrion | 62.89 | 64.1 |
KRH72631 | Soybean | cytosol | 61.32 | 63.52 |
KRG90008 | Soybean | plastid | 55.66 | 56.19 |
GSMUA_AchrUn_... | Banana | cytosol | 47.17 | 53.76 |
CDX86317 | Canola | plastid | 50.94 | 52.77 |
CDY05690 | Canola | mitochondrion, plastid | 49.69 | 52.67 |
CDY48744 | Canola | mitochondrion, plastid | 49.69 | 51.97 |
CDX85324 | Canola | plastid | 44.97 | 51.44 |
GSMUA_Achr3P12010_001 | Banana | cytosol | 44.34 | 51.09 |
Bra037498.1-P | Field mustard | plastid | 51.89 | 51.08 |
AT5G48270.1 | Thale cress | plastid | 51.26 | 50.62 |
Bra020708.1-P | Field mustard | mitochondrion | 51.26 | 50.62 |
CDY00069 | Canola | plastid | 48.43 | 50.0 |
Bra036180.1-P | Field mustard | plastid | 49.69 | 49.07 |
CDY19961 | Canola | plastid | 47.17 | 49.02 |
Zm00001d015796_P001 | Maize | cytosol | 29.25 | 48.44 |
Solyc12g015900.1.1 | Tomato | cytosol | 42.14 | 44.97 |
Zm00001d053654_P001 | Maize | plastid | 41.51 | 44.59 |
TraesCS6B01G189500.1 | Wheat | cytosol | 42.14 | 42.95 |
OQU84582 | Sorghum | cytosol | 43.08 | 42.68 |
HORVU6Hr1G032720.1 | Barley | cytosol | 42.14 | 42.54 |
TraesCS6A01G161700.1 | Wheat | cytosol | 41.2 | 41.85 |
TraesCS6D01G150500.1 | Wheat | nucleus | 41.2 | 41.85 |
Solyc03g112130.1.1 | Tomato | cytosol | 41.51 | 41.51 |
Solyc01g097790.2.1 | Tomato | cytosol | 38.36 | 40.8 |
Os02t0198800-01 | Rice | cytosol, nucleus | 40.57 | 34.68 |
Solyc09g075960.1.1 | Tomato | nucleus, peroxisome, plasma membrane | 32.7 | 34.32 |
Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 24.21 | 26.19 |
Solyc08g028780.1.1 | Tomato | mitochondrion | 27.36 | 25.66 |
Solyc11g066930.1.1 | Tomato | nucleus, plastid | 24.21 | 24.14 |
Solyc06g074500.1.1 | Tomato | cytosol | 22.96 | 24.09 |
Solyc01g097830.2.1 | Tomato | cytosol, nucleus, peroxisome | 25.79 | 23.7 |
Protein Annotations
EnsemblPlants:Solyc03g121220.2.1 | EnsemblPlantsGene:Solyc03g121220.2 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF2 | PFAM:PF05910 |
SEG:seg | UniParc:UPI000276713B | UniProt:K4BMS1 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3:+:69377290..69378623
Molecular Weight (calculated)
36476.3 Da
IEP (calculated)
8.462
GRAVY (calculated)
-0.479
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPESLSSLK MPHRVTARAK SFSSQPSIAQ KLKDDPVDPK NAQGSVTCVY QSHIGGYWRN VTVIWRKNMM NHCLTISVDS VENEDHQTCK IDLKPWHFWA
101: KKGYKTFEVD GYQLEAYWDL RSAKFSGSPE PFKDFYVALI AEEEVVLLLG DYKKKAYKRT KSRPALVDAL LFYKKEHVFG KKSFSTRAKF ENNKKESDIV
201: VESSTSGPRD PEMWISIDGI VLIHIKNLQW KFRGNQTVLV NEQHVQVFWD VHSWLFCEPG STHGLFIFKP GVSELESDRD GSSVGGDSDC SDHTKYFSTL
301: SHSRASPFCL FLCAWKIE
101: KKGYKTFEVD GYQLEAYWDL RSAKFSGSPE PFKDFYVALI AEEEVVLLLG DYKKKAYKRT KSRPALVDAL LFYKKEHVFG KKSFSTRAKF ENNKKESDIV
201: VESSTSGPRD PEMWISIDGI VLIHIKNLQW KFRGNQTVLV NEQHVQVFWD VHSWLFCEPG STHGLFIFKP GVSELESDRD GSSVGGDSDC SDHTKYFSTL
301: SHSRASPFCL FLCAWKIE
001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE
Arabidopsis Description
DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.