CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00069	Canola	plastid	95.75	95.13
Bra036180.1-P	Field mustard	plastid	99.67	94.72
CDY48744	Canola	mitochondrion, plastid	87.58	88.16
CDX86317	Canola	plastid	87.91	87.62
CDX85324	Canola	plastid	79.08	87.05
CDY05690	Canola	mitochondrion, plastid	85.29	87.0
AT5G48270.1	Thale cress	plastid	87.25	82.92
CDY27882	Canola	nucleus	58.17	61.17
CDY00849	Canola	nucleus	58.17	61.17
KRH16994	Soybean	cytosol	54.25	54.43
KRH72631	Soybean	cytosol	53.92	53.75
VIT_12s0057g01390.t01	Wine grape	mitochondrion	54.58	53.53
PGSC0003DMT400069001	Potato	plastid	52.61	52.27
Solyc12g044670.1.1	Tomato	plastid	52.61	52.27
GSMUA_AchrUn_...	Banana	cytosol	46.41	50.9
KRG90008	Soybean	plastid	50.65	49.21
PGSC0003DMT400006698	Potato	mitochondrion	49.02	48.7
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	49.02	47.17
GSMUA_Achr3P12010_001	Banana	cytosol	41.83	46.38
Zm00001d015796_P001	Maize	cytosol	27.45	43.75
Zm00001d053654_P001	Maize	plastid	41.18	42.57
OQU84582	Sorghum	cytosol	42.48	40.5
TraesCS6B01G189500.1	Wheat	cytosol	38.89	38.14
CDY66553	Canola	cytosol	34.97	37.94
TraesCS6A01G161700.1	Wheat	cytosol	38.24	37.38
TraesCS6D01G150500.1	Wheat	nucleus	38.24	37.38
HORVU6Hr1G032720.1	Barley	cytosol	38.24	37.14
CDX82547	Canola	cytosol	34.97	36.77
CDY72112	Canola	cytosol, peroxisome, plastid	33.01	35.82
CDY50761	Canola	cytosol, peroxisome, plastid	33.01	35.19
CDY21108	Canola	plastid	32.03	34.75
CDX86191	Canola	plastid	33.01	34.47
CDY52485	Canola	plastid	33.01	34.47
CDY00013	Canola	cytosol, plastid	33.01	34.24
CDY30020	Canola	cytosol, plastid	31.37	34.04
Os02t0198800-01	Rice	cytosol, nucleus	39.87	32.8
CDX85733	Canola	cytosol, nucleus, plastid	28.1	25.07
CDY51100	Canola	cytosol	27.45	24.71
CDX69793	Canola	nucleus	29.41	23.94
CDX77134	Canola	cytosol, plastid	25.16	23.84
CDX97072	Canola	nucleus	29.74	23.51
CDY59819	Canola	cytosol, mitochondrion, plasma membrane	33.33	22.97
CDY30531	Canola	plastid	24.18	22.56
CDX79683	Canola	cytosol	23.2	22.4
CDX84556	Canola	cytosol	23.2	22.12
CDX76763	Canola	plastid	24.51	21.49
CDY56275	Canola	cytosol	9.8	19.61
CDY33155	Canola	cytosol	21.24	16.25

Protein Annotations

EnsemblPlants:CDY19961	EnsemblPlantsGene:GSBRNA2T00009773001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF2	PFAM:PF05910
ProteinID:CDY19961	ProteinID:CDY19961.1	SEG:seg	UniParc:UPI0004EE5D86	UniProt:A0A078G3N1	MapMan:35.2

Description

BnaA09g02900DBnaA09g02900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3N1]

Coordinates

chrLK032102:+:156477..157445

Molecular Weight (calculated)

34617.6 Da

IEP (calculated)

9.014

GRAVY (calculated)

-0.139

Length

306 amino acids

Sequence
(BLAST)

001: MLSFRIPSLG SNPTAFAAKI TDTTKTVAQL KSAATPTPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMISSLDKD MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGTF VEVFWDLRAA KLSGNGSPEP VSEYYVAVVS DEEIVLLLGD LKHKAYKRTK SRPALVEGFI YFKKESVFGK KTFSTRARFD EQRKEHEVVV
201: VMEEKDPEMR ISVDGVVVVH VKNLQWKFRG NQMVLVDKTP VMVYYDVHDW LFGSSESTTT RSGLFLFKPV VVGAMVDDPL SRYNSASSGY GTLHEFCLVL
301: YAWKLE

Best Arabidopsis Sequence Match ( AT5G48270.1 )
(BLAST)

001: MLSFRMPSIG SQPTAFAAKI TDNPKTVAQL KSAASPSPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMVSSLDND MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGNF VEVFWDLRSA KLAGNGSPEP VSDYYVAVVS DEEVVLLLGD LKQKAYKRTK SRPALVEGFI YFKKESIFGK KTFSTRARFD EQRKEHEVVV
201: ESSNGAAEPE MWISVDGIVV VNVKNLQWKF RGNQMVMVDR TPVMVYYDVH DWLFASSETA ASSGLFLFKP VPVGAMVDES FSDAEEGDSG GGSSPLSRYN
301: SASSGFGPLH DFCLFLYAWK LE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9LUA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.