Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84582 | Sorghum | cytosol | 93.58 | 86.29 |
| Zm00001d015796_P001 | Maize | cytosol | 55.74 | 85.94 |
| TraesCS6B01G189500.1 | Wheat | cytosol | 62.5 | 59.29 |
| TraesCS6D01G150500.1 | Wheat | nucleus | 62.5 | 59.11 |
| HORVU6Hr1G032720.1 | Barley | cytosol | 62.84 | 59.05 |
| TraesCS6A01G161700.1 | Wheat | cytosol | 61.82 | 58.47 |
| Os02t0198800-01 | Rice | cytosol, nucleus | 66.55 | 52.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.66 | 52.69 |
| AT4G12690.2 | Thale cress | nucleus | 45.27 | 47.02 |
| CDY00849 | Canola | nucleus | 44.93 | 45.7 |
| CDY27882 | Canola | nucleus | 44.93 | 45.7 |
| Solyc12g044670.1.1 | Tomato | plastid | 46.96 | 45.13 |
| PGSC0003DMT400069001 | Potato | plastid | 46.62 | 44.81 |
| Bra015139.1-P | Field mustard | nucleus | 44.93 | 44.04 |
| GSMUA_Achr3P12010_001 | Banana | cytosol | 40.54 | 43.48 |
| AT2G04220.1 | Thale cress | cytosol | 44.59 | 43.0 |
| PGSC0003DMT400006698 | Potato | mitochondrion | 44.59 | 42.86 |
| CDY48744 | Canola | mitochondrion, plastid | 43.24 | 42.11 |
| CDX85324 | Canola | plastid | 39.53 | 42.09 |
| CDX86317 | Canola | plastid | 43.58 | 42.02 |
| VIT_12s0057g01390.t01 | Wine grape | mitochondrion | 44.26 | 41.99 |
| Solyc03g121220.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 44.59 | 41.51 |
| KRH72631 | Soybean | cytosol | 42.91 | 41.37 |
| CDY05690 | Canola | mitochondrion, plastid | 41.89 | 41.33 |
| CDY00069 | Canola | plastid | 42.91 | 41.23 |
| CDY19961 | Canola | plastid | 42.57 | 41.18 |
| AT5G48270.1 | Thale cress | plastid | 44.59 | 40.99 |
| Bra037498.1-P | Field mustard | plastid | 44.26 | 40.56 |
| KRH16994 | Soybean | cytosol | 41.22 | 40.0 |
| Bra036180.1-P | Field mustard | plastid | 43.24 | 39.75 |
| Bra020708.1-P | Field mustard | mitochondrion | 43.24 | 39.75 |
| Zm00001d042425_P001 | Maize | plastid | 40.54 | 38.59 |
| KRG90008 | Soybean | plastid | 40.54 | 38.1 |
| PGSC0003DMT400076600 | Potato | cytosol | 37.5 | 37.25 |
| Zm00001d035694_P001 | Maize | cytosol | 38.18 | 37.17 |
| Solyc12g015900.1.1 | Tomato | cytosol | 36.82 | 36.58 |
| KRH14191 | Soybean | cytosol | 37.84 | 36.01 |
| Zm00001d013042_P001 | Maize | plastid | 34.8 | 35.4 |
| AT3G13229.1 | Thale cress | cytosol | 34.12 | 34.95 |
| Zm00001d021869_P001 | Maize | plastid | 33.11 | 34.51 |
| CDY66553 | Canola | cytosol | 32.43 | 34.04 |
| Zm00001d034527_P001 | Maize | plastid | 33.78 | 34.01 |
| CDX82547 | Canola | cytosol | 32.43 | 32.99 |
| Bra001495.1-P | Field mustard | cytosol | 32.43 | 32.99 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 27.03 | 23.26 |
| Zm00001d031962_P001 | Maize | plastid | 23.99 | 22.47 |
| Zm00001d050436_P001 | Maize | plastid | 30.74 | 22.3 |
| Zm00001d052520_P001 | Maize | plastid | 23.99 | 22.26 |
| Zm00001d025337_P001 | Maize | cytosol | 25.68 | 22.03 |
| Zm00001d004919_P001 | Maize | plastid | 23.99 | 21.98 |
| Zm00001d005752_P001 | Maize | plastid | 30.74 | 21.62 |
| Zm00001d032164_P001 | Maize | plastid | 29.39 | 21.53 |
| Zm00001d020470_P001 | Maize | plastid | 30.07 | 21.14 |
| Zm00001d045119_P001 | Maize | plastid | 24.32 | 20.51 |
| Zm00001d037575_P001 | Maize | cytosol | 11.15 | 13.69 |
Protein Annotations
| EnsemblPlants:Zm00001d053654_P001 | EnsemblPlants:Zm00001d053654_T001 | EnsemblPlantsGene:Zm00001d053654 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF2 |
| PFAM:PF05910 | ProteinID:AQK60016.1 | SEG:seg | UniParc:UPI00084285E4 | UniProt:A0A1D6QR84 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4:-:238243965..238244855
Molecular Weight (calculated)
32213.9 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.234
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERVGCSNA ATSFDDSATG RTAGAAAAQC STVSVFLAKI NGAARHVTAV WSKSLINQSF TVSIERPGDG DGPVTHRVEL KPWPFWSKKG GKALDVGGGD
101: RVDMFWDLRS AKFAAAGSSP EPAGGYYVAL VSNDEVVLLL GDCKKDAYKR TKARPSLEDA VLVCRRESVF GRRSFAARAR LDARRSKEHE IVIEYALAAA
201: GSSRDPEMWI TVDGSVLLHV KSLQWKFRGN ETLLVDEEPV QVIWDVHDWL FAGPGTQAVF VFKPGAPPEI QEDSGGNAIQ GDGTDFCFFL QAWRTE
101: RVDMFWDLRS AKFAAAGSSP EPAGGYYVAL VSNDEVVLLL GDCKKDAYKR TKARPSLEDA VLVCRRESVF GRRSFAARAR LDARRSKEHE IVIEYALAAA
201: GSSRDPEMWI TVDGSVLLHV KSLQWKFRGN ETLLVDEEPV QVIWDVHDWL FAGPGTQAVF VFKPGAPPEI QEDSGGNAIQ GDGTDFCFFL QAWRTE
001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE
Arabidopsis Description
At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.