Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER87970 | Sorghum | plastid | 88.89 | 86.91 |
| Os06t0181800-00 | Rice | plastid | 67.24 | 67.24 |
| TraesCS7A01G146000.1 | Wheat | plastid | 62.11 | 63.93 |
| Zm00001d037575_P001 | Maize | cytosol | 41.31 | 60.17 |
| TraesCS7D01G147500.1 | Wheat | plastid | 61.82 | 55.22 |
| TraesCS7B01G048400.1 | Wheat | plastid | 61.25 | 54.71 |
| HORVU7Hr1G029920.1 | Barley | mitochondrion | 60.11 | 53.02 |
| Zm00001d020470_P001 | Maize | plastid | 43.3 | 36.1 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 38.75 | 35.79 |
| Zm00001d005752_P001 | Maize | plastid | 42.73 | 35.63 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 26.78 | 35.34 |
| Zm00001d050436_P001 | Maize | plastid | 41.03 | 35.29 |
| Zm00001d032164_P001 | Maize | plastid | 40.46 | 35.15 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 38.75 | 34.96 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 38.18 | 32.92 |
| KRH15788 | Soybean | plastid | 31.05 | 31.87 |
| KRH05263 | Soybean | mitochondrion, plastid | 30.2 | 31.18 |
| KRH52365 | Soybean | plastid | 27.92 | 29.43 |
| CDY51100 | Canola | cytosol | 28.49 | 29.41 |
| KRH61697 | Soybean | plastid | 25.93 | 29.26 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 28.49 | 29.15 |
| PGSC0003DMT400068894 | Potato | plastid | 28.77 | 28.94 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 27.92 | 28.91 |
| Bra028555.1-P | Field mustard | nucleus | 27.92 | 28.57 |
| Zm00001d035694_P001 | Maize | cytosol | 24.22 | 27.96 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 28.77 | 27.22 |
| CDX97072 | Canola | nucleus | 29.91 | 27.13 |
| Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 29.91 | 27.06 |
| Zm00001d034527_P001 | Maize | plastid | 22.51 | 26.87 |
| CDX69793 | Canola | nucleus | 28.49 | 26.6 |
| Zm00001d013042_P001 | Maize | plastid | 21.94 | 26.46 |
| Zm00001d031962_P001 | Maize | plastid | 23.65 | 26.27 |
| CDX76763 | Canola | plastid | 25.93 | 26.07 |
| Zm00001d015796_P001 | Maize | cytosol | 14.24 | 26.04 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 28.21 | 25.45 |
| Bra007811.1-P | Field mustard | plastid | 25.36 | 25.43 |
| CDY56275 | Canola | cytosol | 10.83 | 24.84 |
| Zm00001d052520_P001 | Maize | plastid | 22.51 | 24.76 |
| Zm00001d021869_P001 | Maize | plastid | 19.94 | 24.65 |
| Zm00001d053654_P001 | Maize | plastid | 20.51 | 24.32 |
| Zm00001d025337_P001 | Maize | cytosol | 23.65 | 24.06 |
| Zm00001d004919_P001 | Maize | plastid | 21.94 | 23.84 |
| Zm00001d042425_P001 | Maize | plastid | 21.08 | 23.79 |
| AT2G25200.1 | Thale cress | plastid | 23.93 | 23.73 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 22.79 | 23.26 |
Protein Annotations
| EnsemblPlants:Zm00001d045119_P001 | EnsemblPlants:Zm00001d045119_T001 | EnsemblPlantsGene:Zm00001d045119 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF8 |
| PFAM:PF05910 | ProteinID:AQL01600.1 | SEG:seg | UniParc:UPI0008459D63 | UniProt:A0A1D6NTT6 | MapMan:35.2 |
Description
DUF868 family protein
Coordinates
chr9:-:13420012..13421067
Molecular Weight (calculated)
37591.7 Da
IEP (calculated)
8.275
GRAVY (calculated)
-0.284
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSCFAGGD PSAAPPSSSA TSVYWTHLGG VTLTWSRAPI GLLLAAELSL RPAGDVHGGE DATPARFAFR PWLPWRRRGS KRFAAPGGRA VKFSWDLSRA
101: RFAATGRRPE PVSRYSLRVW VDGELALAVG DHAPAAGLLL SRRESAAVVA DGRGEAYSTA VDVAGERHDV SLAVEGSTMW VAIDGEKALQ VRRLRWKFRG
201: SERLDLPTGR RVRVTWDLHG WLFCPDAAAA VFVLRFETSD AAEADDEGDA DESEAGPHVL RQPSFSFRNH QAHGSGGDSW FSSDSDRRGW MRGPFRSGGS
301: DTSPSVSVAS TSAASSAASV ATVSEWAAAE EAATLKDGGG FSLVVQLWKK R
101: RFAATGRRPE PVSRYSLRVW VDGELALAVG DHAPAAGLLL SRRESAAVVA DGRGEAYSTA VDVAGERHDV SLAVEGSTMW VAIDGEKALQ VRRLRWKFRG
201: SERLDLPTGR RVRVTWDLHG WLFCPDAAAA VFVLRFETSD AAEADDEGDA DESEAGPHVL RQPSFSFRNH QAHGSGGDSW FSSDSDRRGW MRGPFRSGGS
301: DTSPSVSVAS TSAASSAASV ATVSEWAAAE EAATLKDGGG FSLVVQLWKK R
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.