Factsheet for Zm00001d042425_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04078	Sorghum	plastid	92.93	89.2
HORVU3Hr1G092470.1	Barley	plastid	80.71	79.68
TraesCS3A01G415900.1	Wheat	plastid	81.03	79.25
Os01t0909400-01	Rice	cytosol, plastid	82.32	78.77
TraesCS3D01G411600.1	Wheat	plastid	81.03	77.78
TraesCS3B01G451100.1	Wheat	plastid	79.42	77.19
Solyc03g112130.1.1	Tomato	cytosol	54.66	53.46
PGSC0003DMT400046694	Potato	cytosol	54.66	53.29
VIT_01s0137g00740.t01	Wine grape	cytosol	49.84	51.67
KRH03859	Soybean	cytosol	44.37	51.49
GSMUA_Achr10P...	Banana	cytosol	52.09	50.94
KRH57148	Soybean	cytosol	53.05	50.61
VIT_17s0000g09400.t01	Wine grape	cytosol	53.05	50.15
KRH54304	Soybean	cytosol	50.48	48.16
KRH63641	Soybean	cytosol	49.84	47.55
Zm00001d015796_P001	Maize	cytosol	27.01	43.75
Zm00001d035694_P001	Maize	cytosol	40.84	41.78
Zm00001d053654_P001	Maize	plastid	38.59	40.54
Zm00001d013042_P001	Maize	plastid	34.41	36.77
Zm00001d034527_P001	Maize	plastid	33.44	35.37
Zm00001d021869_P001	Maize	plastid	30.87	33.8
Zm00001d025337_P001	Maize	cytosol	27.65	24.93
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	27.01	24.42
Zm00001d031962_P001	Maize	plastid	24.76	24.37
Zm00001d050436_P001	Maize	plastid	28.94	22.06
Zm00001d032164_P001	Maize	plastid	28.62	22.03
Zm00001d005752_P001	Maize	plastid	28.94	21.38
Zm00001d020470_P001	Maize	plastid	28.94	21.38
Zm00001d045119_P001	Maize	plastid	23.79	21.08
Zm00001d052520_P001	Maize	plastid	20.26	19.75
Zm00001d004919_P001	Maize	plastid	20.26	19.5
Zm00001d037575_P001	Maize	cytosol	9.0	11.62

Protein Annotations

EMBL:BT035844	EMBL:EU965721	EnsemblPlants:Zm00001d042425_P001	EnsemblPlants:Zm00001d042425_T001	EnsemblPlantsGene:Zm00001d042425	EntrezGene:100193554
InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF12	PFAM:PF05910	ProteinID:ONM35308.1	SEG:seg
UniParc:UPI00017B7023	UniProt:B4FFF6	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3:+:166836824..166837759

Molecular Weight (calculated)

34405.8 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.260

Length

311 amino acids

Sequence
(BLAST)

001: MMQDLFSVPS CFSAGEKLPD VPASAAATTR SGQSAATLVY RAGIAGHDRL VTVTWCRNLL THGLTVSIEG SAGGGKDKSG GGREWGDADG GAASSSNKGC
101: STACKVEMQP WHFWRKYGAK QFHVDGRAVD VVWDLRSARY SDEPEPLSDY YVAVVSDEEV VLLLGNLKKE AFRRTGSRPS LRDAALVCKK EHVFSKKRFL
201: TKARFHDRGK LHDISIECSS SNLGGGGVDV DMVIKIDGYV NVLVRHLQWK FRGNECISIN QLKVQVYWDA HDWIFGTGVR NALFIFKPEP LPSATNEYSD
301: FCLFLYAWKL E

Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)

001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE

Arabidopsis Description

At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.