Factsheet for GSMUA_Achr10P16760_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plastid	50.0	56.58
Solyc03g112130.1.1	Tomato	cytosol	55.97	55.97
PGSC0003DMT400046694	Potato	cytosol	55.97	55.8
KRH57148	Soybean	cytosol	56.29	54.91
KRH54304	Soybean	cytosol	55.97	54.6
VIT_01s0137g00740.t01	Wine grape	cytosol	51.26	54.33
VIT_17s0000g09400.t01	Wine grape	cytosol	55.03	53.19
KRH63641	Soybean	cytosol	54.4	53.07
KRH03859	Soybean	cytosol	44.65	52.99
Zm00001d042425_P001	Maize	plastid	50.94	52.09
HORVU3Hr1G092470.1	Barley	plastid	50.0	50.48
EES04078	Sorghum	plastid	50.94	50.0
TraesCS3A01G415900.1	Wheat	plastid	49.69	49.69
Os01t0909400-01	Rice	cytosol, plastid	50.63	49.54
TraesCS3B01G451100.1	Wheat	plastid	48.43	48.12
TraesCS3D01G411600.1	Wheat	plastid	48.74	47.84
GSMUA_AchrUn_...	Banana	cytosol	40.88	46.59
GSMUA_Achr3P12010_001	Banana	cytosol	35.85	41.3
GSMUA_Achr5P24690_001	Banana	cytosol	35.22	38.62
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	31.45	38.31
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	31.76	38.26
GSMUA_Achr3P03050_001	Banana	nucleus	29.25	31.63
GSMUA_Achr8P07610_001	Banana	cytosol	27.67	30.56
GSMUA_Achr11P...	Banana	plastid	27.36	30.0
GSMUA_Achr8P29560_001	Banana	nucleus	27.67	29.83
GSMUA_Achr10P...	Banana	nucleus, plastid	27.67	28.85
GSMUA_Achr2P20270_001	Banana	cytosol	26.73	27.78
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	30.19	25.26
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	31.13	24.32
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	28.62	23.39
GSMUA_Achr3P04550_001	Banana	plastid	15.09	18.05

Protein Annotations

EnsemblPlants:GSMUA_Achr10P16760_001	EnsemblPlants:GSMUA_Achr10T16760_001	EnsemblPlantsGene:GSMUA_Achr10G16760_001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF12
PFAM:PF05910	SEG:seg	UniParc:UPI000295C24A	UniProt:M0RIV1	MapMan:35.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G16760_001]

Coordinates

chr10:-:24165430..24166386

Molecular Weight (calculated)

35374.2 Da

IEP (calculated)

8.490

GRAVY (calculated)

-0.195

Length

318 amino acids

Sequence
(BLAST)

001: MQDPLFTFPS CFAPGERLPE DPTTAAATKS GQSIVTSIYR TKIAGHCRLI TVTWCRDVLV RGLSVSVDDE GSGSGTESCG GGGGSQLVCF KVEMRPWHFW
101: RKHGSRRFQV EGKAVDVLWD LRSAKFSGEP EPQSGFYVAV ASDHEVVLLL GDNKKEAYRK TWCRPATIDA TLVSRKEHVF GRTRFVTRAR FQDKDRPHEI
201: AIEYSSSSSG CSIGGNIDPE MVVKIDGSVA IHVKHLQWKF RGNECITVSR ARVEVYWDVH DWLFSPGLRH AMFIFKPIAL LSSSMPLSSS SSSTVDKHIA
301: LMTGSSGFCL FLYAWKLD

Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)

001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE

Arabidopsis Description

At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.