Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 2
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P03050_001 | Banana | nucleus | 68.95 | 71.77 |
GSMUA_Achr10P... | Banana | nucleus, plastid | 71.24 | 71.48 |
GSMUA_Achr8P29560_001 | Banana | nucleus | 63.73 | 66.1 |
GSMUA_Achr11P... | Banana | plastid | 52.61 | 55.52 |
GSMUA_Achr8P07610_001 | Banana | cytosol | 45.42 | 48.26 |
VIT_06s0061g01360.t01 | Wine grape | plastid | 45.1 | 46.15 |
Solyc06g074500.1.1 | Tomato | cytosol | 42.81 | 43.23 |
PGSC0003DMT400018411 | Potato | cytosol | 42.81 | 43.23 |
VIT_08s0007g03840.t01 | Wine grape | nucleus | 42.16 | 42.86 |
KRH26585 | Soybean | plastid | 41.5 | 42.19 |
KRH67854 | Soybean | cytosol | 42.16 | 41.88 |
KRG96144 | Soybean | nucleus | 41.83 | 41.69 |
KRH22720 | Soybean | plastid | 40.85 | 41.39 |
TraesCS2D01G290200.1 | Wheat | cytosol | 44.44 | 40.96 |
TraesCS2B01G308700.1 | Wheat | cytosol | 44.77 | 40.9 |
PGSC0003DMT400006889 | Potato | nucleus | 20.26 | 40.52 |
AT2G27770.1 | Thale cress | plastid | 41.83 | 40.0 |
TraesCS2A01G292300.1 | Wheat | cytosol | 44.12 | 39.82 |
TraesCS5B01G130100.1 | Wheat | plastid | 41.18 | 39.75 |
TraesCS5A01G130200.1 | Wheat | plastid | 40.85 | 39.68 |
Zm00001d025337_P001 | Maize | cytosol | 44.44 | 39.42 |
KRH25175 | Soybean | cytosol | 40.52 | 39.12 |
CDX77134 | Canola | cytosol, plastid | 41.18 | 39.01 |
Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 43.79 | 38.95 |
TraesCS5D01G137700.1 | Wheat | plastid | 40.85 | 38.94 |
Bra034367.1-P | Field mustard | plastid | 41.18 | 38.77 |
HORVU5Hr1G041450.1 | Barley | plastid | 40.52 | 38.51 |
KRH30504 | Soybean | plastid | 40.85 | 38.46 |
Os04t0407500-00 | Rice | cytosol, plastid | 31.05 | 38.0 |
KXG22966 | Sorghum | plastid | 40.52 | 37.92 |
Zm00001d052520_P001 | Maize | plastid | 39.22 | 37.62 |
CDY30531 | Canola | plastid | 40.2 | 37.5 |
Os12t0149000-01 | Rice | plastid | 40.2 | 37.5 |
Zm00001d004919_P001 | Maize | plastid | 39.54 | 37.46 |
OQU82880 | Sorghum | plastid | 40.2 | 37.39 |
Solyc11g066930.1.1 | Tomato | nucleus, plastid | 38.89 | 37.3 |
Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 35.62 | 37.07 |
TraesCS4B01G134800.1 | Wheat | plastid | 38.24 | 37.03 |
TraesCS4A01G183900.1 | Wheat | plastid | 37.91 | 36.83 |
GSMUA_Achr5P24690_001 | Banana | cytosol | 34.64 | 36.55 |
KXG26216 | Sorghum | cytosol | 43.79 | 35.92 |
TraesCS4D01G129600.1 | Wheat | plastid | 37.25 | 35.85 |
TraesCS7A01G277900.1 | Wheat | plastid | 34.64 | 35.69 |
GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 30.07 | 35.25 |
TraesCS7D01G277700.1 | Wheat | plastid | 34.64 | 35.1 |
CDX79683 | Canola | cytosol | 36.27 | 35.02 |
CDX84556 | Canola | cytosol | 36.6 | 34.89 |
Bra023071.1-P | Field mustard | cytosol | 36.6 | 34.89 |
TraesCS7B01G175700.1 | Wheat | plastid | 34.31 | 34.77 |
HORVU7Hr1G058790.3 | Barley | plastid | 34.31 | 34.65 |
AT2G36470.1 | Thale cress | nucleus | 36.93 | 34.56 |
GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 29.09 | 33.71 |
Zm00001d031962_P001 | Maize | plastid | 34.31 | 33.23 |
HORVU4Hr1G001870.2 | Barley | cytosol | 34.97 | 31.1 |
GSMUA_AchrUn_... | Banana | plastid | 27.12 | 29.54 |
TraesCS4A01G302100.1 | Wheat | cytosol | 33.99 | 29.38 |
TraesCS4D01G010300.1 | Wheat | cytosol | 33.66 | 29.34 |
TraesCS4B01G012200.1 | Wheat | cytosol | 33.66 | 29.18 |
GSMUA_Achr10P... | Banana | cytosol | 27.78 | 26.73 |
CDY33155 | Canola | cytosol | 34.31 | 26.25 |
GSMUA_AchrUn_... | Banana | cytosol | 23.86 | 26.16 |
GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 28.43 | 22.89 |
GSMUA_Achr3P12010_001 | Banana | cytosol | 20.59 | 22.83 |
GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 28.43 | 22.36 |
GSMUA_Achr3P04550_001 | Banana | plastid | 18.3 | 21.05 |
GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 27.12 | 20.39 |
Protein Annotations
EnsemblPlants:GSMUA_Achr2P20270_001 | EnsemblPlants:GSMUA_Achr2T20270_001 | EnsemblPlantsGene:GSMUA_Achr2G20270_001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF16 |
PFAM:PF05910 | SEG:seg | UniParc:UPI000296DF09 | UniProt:M0S9L8 | MapMan:35.2 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G20270_001]
Coordinates
chr2:+:20138190..20139110
Molecular Weight (calculated)
34017.4 Da
IEP (calculated)
7.446
GRAVY (calculated)
-0.341
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNFASCFSE HAVKVSEPSC SGSSSSGGGN SLVVDTSCSV LSAVTCLYRT RLIATQRELL IRVAWSKGHA GPMLSVGIDD NPSVDRWEPN AMNCQLLRKK
101: KGSRAYAAGD CAVRLHWDIS SAKLGSGPEP IDGFYVVMVV NSELALSLGD MSEECTRRFE EALPVAESSM ISRKEQVIGQ GLHSTRARFR EDGGDHEITI
201: RCKEDGWDAK ESELSVTVDK KRVVHVRRLR WNFRGNQTLF IDGSPVDMMW DMHGWRFGNA PGWAVFMFRK RSALESRLWL EEETVDREQG GASGFSLLIQ
301: QAFKST
101: KGSRAYAAGD CAVRLHWDIS SAKLGSGPEP IDGFYVVMVV NSELALSLGD MSEECTRRFE EALPVAESSM ISRKEQVIGQ GLHSTRARFR EDGGDHEITI
201: RCKEDGWDAK ESELSVTVDK KRVVHVRRLR WNFRGNQTLF IDGSPVDMMW DMHGWRFGNA PGWAVFMFRK RSALESRLWL EEETVDREQG GASGFSLLIQ
301: QAFKST
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.