CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22720	Soybean	plastid	95.35	95.03
KRH25175	Soybean	cytosol	76.08	72.24
VIT_06s0061g01360.t01	Wine grape	plastid	71.43	71.91
KRH30504	Soybean	plastid	75.75	70.15
Solyc06g074500.1.1	Tomato	cytosol	61.79	61.39
PGSC0003DMT400018411	Potato	cytosol	61.13	60.73
AT2G27770.1	Thale cress	plastid	60.8	57.19
CDX77134	Canola	cytosol, plastid	60.13	56.04
Bra034367.1-P	Field mustard	plastid	59.14	54.77
CDY30531	Canola	plastid	58.8	53.96
KRH67854	Soybean	cytosol	52.82	51.62
KRG96144	Soybean	nucleus	52.16	51.14
Solyc11g066930.1.1	Tomato	nucleus, plastid	52.49	49.53
GSMUA_Achr3P03050_001	Banana	nucleus	43.19	44.22
GSMUA_Achr10P...	Banana	nucleus, plastid	42.86	42.3
GSMUA_Achr8P29560_001	Banana	nucleus	40.86	41.69
GSMUA_Achr2P20270_001	Banana	cytosol	42.19	41.5
KRH68710	Soybean	plastid	40.86	41.41
GSMUA_Achr11P...	Banana	plastid	39.2	40.69
KRH32026	Soybean	cytosol, plastid	40.53	40.67
KRG96949	Soybean	cytosol, plastid	41.2	40.52
KRH71412	Soybean	cytosol	39.53	39.53
KRG95548	Soybean	cytosol	39.2	39.2
KRG92651	Soybean	cytosol	38.87	39.0
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	38.21	38.21
GSMUA_Achr8P07610_001	Banana	cytosol	36.54	38.19
KRH67230	Soybean	cytosol	37.87	36.42
TraesCS7A01G277900.1	Wheat	plastid	32.56	33.0
TraesCS7D01G277700.1	Wheat	plastid	32.89	32.78
TraesCS7B01G175700.1	Wheat	plastid	32.56	32.45
Zm00001d052520_P001	Maize	plastid	33.89	31.97
OQU82880	Sorghum	plastid	34.88	31.91
TraesCS5B01G130100.1	Wheat	plastid	33.55	31.86
HORVU7Hr1G058790.3	Barley	plastid	31.89	31.68
KXG22966	Sorghum	plastid	34.22	31.5
TraesCS5A01G130200.1	Wheat	plastid	32.89	31.43
Zm00001d004919_P001	Maize	plastid	33.55	31.27
TraesCS5D01G137700.1	Wheat	plastid	32.89	30.84
Os12t0149000-01	Rice	plastid	33.22	30.49
TraesCS2B01G308700.1	Wheat	cytosol	33.89	30.45
HORVU5Hr1G041450.1	Barley	plastid	32.56	30.43
TraesCS2D01G290200.1	Wheat	cytosol	33.55	30.42
KRH03859	Soybean	cytosol	26.58	29.85
KRH57148	Soybean	cytosol	32.23	29.75
TraesCS4B01G134800.1	Wheat	plastid	31.23	29.75
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	33.89	29.65
Os04t0407500-00	Rice	cytosol, plastid	24.58	29.6
TraesCS4A01G183900.1	Wheat	plastid	30.9	29.52
TraesCS2A01G292300.1	Wheat	cytosol	33.22	29.5
KRH68709	Soybean	plastid	29.57	29.18
KRH63641	Soybean	cytosol	31.56	29.14
Zm00001d025337_P001	Maize	cytosol	33.22	28.99
KRH54304	Soybean	cytosol	31.23	28.83
TraesCS4D01G129600.1	Wheat	plastid	30.23	28.62
Zm00001d031962_P001	Maize	plastid	29.57	28.16
KRG96948	Soybean	plastid	28.9	27.88
KRH34068	Soybean	plastid	30.23	27.49
KRG92733	Soybean	plastid	30.23	27.49
KRG90008	Soybean	plastid	28.57	27.3
KXG26216	Sorghum	cytosol	33.55	27.08
TraesCS4B01G012200.1	Wheat	cytosol	31.56	26.91
HORVU4Hr1G001870.2	Barley	cytosol	30.56	26.74
KRH72631	Soybean	cytosol	27.24	26.71
KRH16994	Soybean	cytosol	26.91	26.56
TraesCS4A01G302100.1	Wheat	cytosol	31.23	26.55
TraesCS4D01G010300.1	Wheat	cytosol	30.56	26.21
KRH52365	Soybean	plastid	28.9	26.13
KRH61697	Soybean	plastid	25.91	25.08
KRH15788	Soybean	plastid	26.91	23.68
KRH05263	Soybean	mitochondrion, plastid	26.25	23.24
KRH14191	Soybean	cytosol	23.59	22.83

Protein Annotations

EMBL:ACUP02007722	EMBL:BT093527	EnsemblPlants:KRH26585	EnsemblPlantsGene:GLYMA_12G182100	EntrezGene:100798692	InterPro:DUF868_pln
PANTHER:PTHR31972	PANTHER:PTHR31972:SF10	PFAM:PF05910	ProteinID:KRH26585	ProteinID:KRH26585.1	SEG:seg
UniParc:UPI0001B15CD7	UniProt:C6T7U3	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:34299658..34301166

Molecular Weight (calculated)

33930.3 Da

IEP (calculated)

8.555

GRAVY (calculated)

-0.303

Length

301 amino acids

Sequence
(BLAST)

001: MNMSDMISCF NENAVNVSHS SCSSYSNNAC ISPSVTPSTQ NSVSSVYKTT LSNQKQLLIT VTWCKSHSNQ GLNVTFGEEN NNPLAPSFRL NTNSRFFRKK
101: KGSKMLESED SKVEVFWDLS KAKYDTGPEP VEGFYVAILV DAEIGLILGE DVAKKFKTRT LLGNVSLLSR REHCSGNAVY ATKAQFCDTG TWHDILIRCS
201: GENEGLKAPV LSVCIDKKTV IRVKRLQWNF RGNQTIFVDG LLVDLLWDVH NWFFNPASGN AVFMFRTRSG LDSRLWLEEK IAQKDKDRVE FSLLIYAYKN
301: T

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.