Factsheet for HORVU5Hr1G041450.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G130200.1	Wheat	plastid	93.17	95.24
TraesCS5D01G137700.1	Wheat	plastid	94.1	94.39
TraesCS5B01G130100.1	Wheat	plastid	92.86	94.32
KXG22966	Sorghum	plastid	71.12	70.03
Zm00001d004919_P001	Maize	plastid	68.63	68.42
Zm00001d052520_P001	Maize	plastid	67.7	68.34
OQU82880	Sorghum	plastid	69.25	67.78
Os12t0149000-01	Rice	plastid	68.94	67.68
GSMUA_Achr8P29560_001	Banana	nucleus	39.13	42.71
GSMUA_Achr10P...	Banana	nucleus, plastid	39.13	41.31
GSMUA_Achr2P20270_001	Banana	cytosol	38.51	40.52
GSMUA_Achr3P03050_001	Banana	nucleus	36.65	40.14
GSMUA_Achr8P07610_001	Banana	cytosol	34.78	38.89
GSMUA_Achr11P...	Banana	plastid	34.78	38.62
PGSC0003DMT400006889	Potato	nucleus	18.32	38.56
HORVU7Hr1G058790.3	Barley	plastid	34.78	36.96
VIT_08s0007g03840.t01	Wine grape	nucleus	34.16	36.54
VIT_06s0061g01360.t01	Wine grape	plastid	32.61	35.12
KRH67854	Soybean	cytosol	32.3	33.77
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	30.43	33.33
KRG96144	Soybean	nucleus	31.06	32.57
KRH26585	Soybean	plastid	30.43	32.56
CDX79683	Canola	cytosol	31.99	32.49
KRH22720	Soybean	plastid	30.43	32.45
CDX84556	Canola	cytosol	31.99	32.09
PGSC0003DMT400018411	Potato	cytosol	30.12	32.01
HORVU4Hr1G001870.2	Barley	cytosol	34.16	31.98
Bra023071.1-P	Field mustard	cytosol	31.68	31.78
Solyc06g074500.1.1	Tomato	cytosol	29.19	31.02
AT2G36470.1	Thale cress	nucleus	31.37	30.89
Solyc11g066930.1.1	Tomato	nucleus, plastid	30.43	30.72
CDX77134	Canola	cytosol, plastid	30.75	30.65
HORVU5Hr1G109570.1	Barley	cytosol, plastid	27.64	30.48
AT2G27770.1	Thale cress	plastid	30.12	30.31
HORVU2Hr1G038060.1	Barley	plastid	26.09	30.0
KRH25175	Soybean	cytosol	29.19	29.65
Bra034367.1-P	Field mustard	plastid	29.81	29.54
CDY30531	Canola	plastid	29.81	29.27
KRH30504	Soybean	plastid	29.5	29.23
CDY33155	Canola	cytosol	29.81	24.0
HORVU6Hr1G032720.1	Barley	cytosol	23.29	23.81
HORVU3Hr1G092470.1	Barley	plastid	21.43	21.9
HORVU7Hr1G029920.1	Barley	mitochondrion	26.4	21.36
HORVU5Hr1G065520.1	Barley	plastid	27.02	19.25

Protein Annotations

EnsemblPlants:HORVU5Hr1G041450.1	EnsemblPlantsGene:HORVU5Hr1G041450	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF38	PFAM:PF05910
SEG:seg	UniParc:UPI000B4703BB	UniProt:A0A287QY36	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr5H:+:314794570..314796489

Molecular Weight (calculated)

33541.7 Da

IEP (calculated)

6.669

GRAVY (calculated)

0.090

Length

322 amino acids

Sequence
(BLAST)

001: MVSASSLLLP SSMRDFASCI GDGAVRVACA SPSSTLTSAG GSGSGSGSGS GAASTLAVTA SYRVTPLNSA APSPPLLFRL TWAHSPVGPT LSFSPSAAAP
101: SVLLRRRRGT RSFTLADAGG DADADAEPSL LALFWDLTAA RYDPGASPEP LHGYFVVAVA GAEVVLAVGD LAAEFVKTKF EGQISKARCL PVSRRERVVV
201: ADPAAMHTAS VRFAEGGPEH EVSVGCATSS GGGEELWVSV DGKRAVQAQR LRWNFRGNQT VFVDGAPVDV MWDLHGWWFR DPPGCAVVML RARSALESRL
301: WLEEEGAAPG FSLVLQAFKA PP

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.