Factsheet for GSMUA_Achr8P29560_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus, plastid	67.46	65.25
GSMUA_Achr2P20270_001	Banana	cytosol	66.1	63.73
GSMUA_Achr3P03050_001	Banana	nucleus	62.37	62.59
GSMUA_Achr11P...	Banana	plastid	51.19	52.07
GSMUA_Achr8P07610_001	Banana	cytosol	46.1	47.22
VIT_06s0061g01360.t01	Wine grape	plastid	45.08	44.48
PGSC0003DMT400006889	Potato	nucleus	22.37	43.14
VIT_08s0007g03840.t01	Wine grape	nucleus	43.39	42.52
Solyc06g074500.1.1	Tomato	cytosol	43.39	42.24
PGSC0003DMT400018411	Potato	cytosol	43.39	42.24
KRG96144	Soybean	nucleus	42.71	41.04
KRH67854	Soybean	cytosol	42.71	40.91
KRH26585	Soybean	plastid	41.69	40.86
KRH22720	Soybean	plastid	41.69	40.73
KRH25175	Soybean	cytosol	43.39	40.38
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	39.66	39.8
TraesCS5B01G130100.1	Wheat	plastid	42.71	39.75
TraesCS5A01G130200.1	Wheat	plastid	42.37	39.68
Solyc11g066930.1.1	Tomato	nucleus, plastid	42.37	39.19
HORVU5Hr1G041450.1	Barley	plastid	42.71	39.13
TraesCS5D01G137700.1	Wheat	plastid	42.37	38.94
TraesCS2D01G290200.1	Wheat	cytosol	43.73	38.86
Zm00001d025337_P001	Maize	cytosol	45.42	38.84
KRH30504	Soybean	plastid	42.71	38.77
TraesCS7D01G277700.1	Wheat	plastid	39.66	38.74
TraesCS7A01G277900.1	Wheat	plastid	38.98	38.72
HORVU7Hr1G058790.3	Barley	plastid	39.32	38.28
TraesCS2B01G308700.1	Wheat	cytosol	43.39	38.21
AT2G27770.1	Thale cress	plastid	41.36	38.12
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	44.41	38.08
TraesCS7B01G175700.1	Wheat	plastid	38.98	38.08
CDX77134	Canola	cytosol, plastid	41.02	37.46
TraesCS2A01G292300.1	Wheat	cytosol	42.71	37.17
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	32.54	36.78
Bra034367.1-P	Field mustard	plastid	40.34	36.62
Os12t0149000-01	Rice	plastid	40.68	36.59
TraesCS4A01G183900.1	Wheat	plastid	38.98	36.51
TraesCS4B01G134800.1	Wheat	plastid	38.98	36.39
Zm00001d052520_P001	Maize	plastid	39.32	36.36
CDY30531	Canola	plastid	40.34	36.28
TraesCS4D01G129600.1	Wheat	plastid	38.98	36.16
Zm00001d004919_P001	Maize	plastid	39.32	35.91
OQU82880	Sorghum	plastid	38.98	34.95
KXG22966	Sorghum	plastid	38.64	34.86
GSMUA_Achr5P24690_001	Banana	cytosol	34.24	34.83
KXG26216	Sorghum	cytosol	43.73	34.58
Os04t0407500-00	Rice	cytosol, plastid	29.15	34.4
Zm00001d031962_P001	Maize	plastid	36.27	33.86
CDX84556	Canola	cytosol	36.27	33.33
Bra023071.1-P	Field mustard	cytosol	36.27	33.33
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	29.49	32.95
CDX79683	Canola	cytosol	35.25	32.81
AT2G36470.1	Thale cress	nucleus	35.93	32.42
HORVU4Hr1G001870.2	Barley	cytosol	37.63	32.27
TraesCS4D01G010300.1	Wheat	cytosol	37.29	31.34
TraesCS4B01G012200.1	Wheat	cytosol	37.29	31.16
TraesCS4A01G302100.1	Wheat	cytosol	35.93	29.94
GSMUA_AchrUn_...	Banana	plastid	28.47	29.89
GSMUA_Achr10P...	Banana	cytosol	29.83	27.67
GSMUA_AchrUn_...	Banana	cytosol	26.1	27.6
GSMUA_Achr3P12010_001	Banana	cytosol	23.73	25.36
CDY33155	Canola	cytosol	34.24	25.25
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	27.46	21.32
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	27.12	20.57
GSMUA_Achr3P04550_001	Banana	plastid	17.63	19.55
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	26.44	19.16

Protein Annotations

EnsemblPlants:GSMUA_Achr8P29560_001	EnsemblPlants:GSMUA_Achr8T29560_001	EnsemblPlantsGene:GSMUA_Achr8G29560_001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF16
PFAM:PF05910	SEG:seg	UniParc:UPI000294AAF4	UniProt:M0TUQ8	MapMan:35.2	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G29560_001]

Coordinates

chr8:+:31914430..31915317

Molecular Weight (calculated)

32595.7 Da

IEP (calculated)

8.495

GRAVY (calculated)

-0.222

Length

295 amino acids

Sequence
(BLAST)

001: MRDFASCFSE NAVKISDASC SGSSSGGLAL DGTSVVSAVT CVYGVRLSTL KELLIRVAWS KSHVGPALSI GIDDSPSLHC WKPDAMSCQL LRKKKGARSY
101: VSGKSAVVVH WDLSSARYGS GPEPIDNFYV VIMVNAEFGL LLGDMSKEHI RRFGGTIPTA EFSMISRKEQ VLGHSRHSTT SRFRDAGRDH EITVRCKGDG
201: CDAKDSELSV CIDRKRVVQV RKLRWNFRGN QTVFVEGSPV DVMWDVHDWW FGNPSGCAMF MFRTRSSPES RLWSSSSSEE EMSGFSLVIQ AFRSP

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.