Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G378000.1 | |
| TraesCS6B01G415700.2 | |
| TraesCS6D01G362500.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27770.1 | TraesCS6A01G378000.1 | AT5G43320.1 | 21798944 |
| AT2G27770.1 | TraesCS6B01G415700.2 | AT5G43320.1 | 21798944 |
| AT2G27770.1 | TraesCS6D01G362500.1 | AT5G43320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G175700.1 | Wheat | plastid | 97.35 | 97.35 |
| TraesCS7A01G277900.1 | Wheat | plastid | 95.36 | 96.97 |
| HORVU7Hr1G058790.3 | Barley | plastid | 93.71 | 93.4 |
| Zm00001d031962_P001 | Maize | plastid | 68.87 | 65.82 |
| TraesCS4D01G010300.1 | Wheat | cytosol | 55.3 | 47.58 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 38.74 | 39.66 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 38.08 | 39.12 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 37.09 | 38.89 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 39.07 | 38.69 |
| TraesCS5D01G137700.1 | Wheat | plastid | 39.07 | 36.76 |
| GSMUA_Achr11P... | Banana | plastid | 33.44 | 34.83 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 35.1 | 34.64 |
| VIT_06s0061g01360.t01 | Wine grape | plastid | 33.77 | 34.11 |
| TraesCS4D01G129600.1 | Wheat | plastid | 34.77 | 33.02 |
| KRH26585 | Soybean | plastid | 32.78 | 32.89 |
| KRH22720 | Soybean | plastid | 32.78 | 32.78 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 34.44 | 31.33 |
| KRH30504 | Soybean | plastid | 33.44 | 31.08 |
| PGSC0003DMT400018411 | Potato | cytosol | 31.13 | 31.02 |
| KRH25175 | Soybean | cytosol | 32.45 | 30.91 |
| PGSC0003DMT400006889 | Potato | nucleus | 15.56 | 30.72 |
| Solyc06g074500.1.1 | Tomato | cytosol | 30.46 | 30.36 |
| AT2G27770.1 | Thale cress | plastid | 32.12 | 30.31 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 30.13 | 30.23 |
| KRH67854 | Soybean | cytosol | 30.79 | 30.19 |
| CDX77134 | Canola | cytosol, plastid | 32.12 | 30.03 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 31.13 | 29.47 |
| KRG96144 | Soybean | nucleus | 29.8 | 29.32 |
| CDY30531 | Canola | plastid | 31.79 | 29.27 |
| Bra034367.1-P | Field mustard | plastid | 31.46 | 29.23 |
| TraesCS1D01G026300.1 | Wheat | cytosol | 28.15 | 27.96 |
| TraesCS5D01G467300.1 | Wheat | cytosol, plastid | 28.48 | 27.92 |
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 26.82 | 27.55 |
| TraesCS2D01G204300.1 | Wheat | plastid | 25.17 | 26.86 |
| CDX84556 | Canola | cytosol | 26.82 | 25.23 |
| Bra023071.1-P | Field mustard | cytosol | 26.82 | 25.23 |
| TraesCS3D01G411600.1 | Wheat | plastid | 26.82 | 25.0 |
| CDX79683 | Canola | cytosol | 26.16 | 24.92 |
| AT2G36470.1 | Thale cress | nucleus | 25.5 | 23.55 |
| TraesCS7D01G147500.1 | Wheat | plastid | 26.16 | 20.1 |
| TraesCS6D01G150500.1 | Wheat | nucleus | 20.2 | 19.49 |
| TraesCS5D01G233300.1 | Wheat | plastid | 26.49 | 19.32 |
| CDY33155 | Canola | cytosol | 25.5 | 19.25 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G277700.1 | EnsemblPlantsGene:TraesCS7D01G277700 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF39 | PFAM:PF05910 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:266874832..266875740
Molecular Weight (calculated)
31901.4 Da
IEP (calculated)
8.144
GRAVY (calculated)
-0.162
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDLSCFGDG SVAVSAASAA SVSGRGCTLD RSLQAATTSV YNASLSSGKG ILIRVTWSRS TVGAPGLTVA FDNEGLLSLS SSRIATQQHV LRKKRGSRSI
101: VTDSGTAVGV HWDVTAAEYS SSPEPSGGDY YLAVVADAEL ALLLGAGDLS RRFASAPAAA TGHLVSRREQ LRCGDAEATA AHATRCRFRE GGEEHEVAVR
201: ACGGRGGVEG EVRVSIDGEE VAGVRRVGWG FRGNRAVLLA DGEVVDVMWD VHDWWFGRRG GGAGAQFMVR SRAEKEGRLW MADQPSAAPP GGFFLHVQCY
301: RR
101: VTDSGTAVGV HWDVTAAEYS SSPEPSGGDY YLAVVADAEL ALLLGAGDLS RRFASAPAAA TGHLVSRREQ LRCGDAEATA AHATRCRFRE GGEEHEVAVR
201: ACGGRGGVEG EVRVSIDGEE VAGVRRVGWG FRGNRAVLLA DGEVVDVMWD VHDWWFGRRG GGAGAQFMVR SRAEKEGRLW MADQPSAAPP GGFFLHVQCY
301: RR
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.