Factsheet for TraesCS3D01G411600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G451100.1	Wheat	plastid	95.99	97.19
TraesCS3A01G415900.1	Wheat	plastid	95.06	96.86
HORVU3Hr1G092470.1	Barley	plastid	92.9	95.56
Zm00001d042425_P001	Maize	plastid	77.78	81.03
Os01t0909400-01	Rice	cytosol, plastid	78.4	78.15
EES04078	Sorghum	plastid	77.47	77.47
Solyc03g112130.1.1	Tomato	cytosol	51.23	52.2
PGSC0003DMT400046694	Potato	cytosol	50.93	51.72
VIT_01s0137g00740.t01	Wine grape	cytosol	47.84	51.67
KRH57148	Soybean	cytosol	50.93	50.61
KRH03859	Soybean	cytosol	41.67	50.37
VIT_17s0000g09400.t01	Wine grape	cytosol	50.62	49.85
KRH54304	Soybean	cytosol	49.38	49.08
KRH63641	Soybean	cytosol	49.07	48.77
GSMUA_Achr10P...	Banana	cytosol	47.84	48.74
TraesCS1D01G026300.1	Wheat	cytosol	38.89	41.45
TraesCS6D01G150500.1	Wheat	nucleus	34.88	36.1
TraesCS5D01G467300.1	Wheat	cytosol, plastid	34.26	36.04
TraesCS2D01G204300.1	Wheat	plastid	31.17	35.69
TraesCS7D01G277700.1	Wheat	plastid	25.0	26.82
TraesCS2D01G290200.1	Wheat	cytosol	24.69	24.1
TraesCS4D01G129600.1	Wheat	plastid	22.22	22.64
TraesCS5D01G137700.1	Wheat	plastid	21.91	22.12
TraesCS4D01G010300.1	Wheat	cytosol	23.77	21.94
TraesCS5D01G233300.1	Wheat	plastid	26.23	20.53
TraesCS7D01G147500.1	Wheat	plastid	21.3	17.56

Protein Annotations

EnsemblPlants:TraesCS3D01G411600.1	EnsemblPlantsGene:TraesCS3D01G411600	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF12	PFAM:PF05910
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:524201764..524202738

Molecular Weight (calculated)

35200.9 Da

IEP (calculated)

8.325

GRAVY (calculated)

-0.249

Length

324 amino acids

Sequence
(BLAST)

001: MQDLFSVPSC FSSGEKQLPD APASAAPATR SGQSAVTLVY RAVISGQSRL VTVTWCRNLL AHGMQVSIEG SAGGGKDKSG GGREHGSGGG IEGGGGGANK
101: SCSACKVEMQ PWHFWRKYGA KQFQVDGRPV DVVWDLRAAR FSDEPEPVSD YYVAVVSGEE VVLLLGNQNK EAFRRTGSRP SLSLGDAAMV CKKEHVFSKK
201: RFLTRARFHE KGKLHDISIE CSSGNLGGGG TDVDMAIKID GCVNVLVKHL QWKFRGNDCI SINKMKVQVY WDAHDWLFGT GMRQALFIFK PQAPSPSPLP
301: DFAAAPAADE FSDFCLFLYA WKIE

Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)

001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.