Factsheet for PGSC0003DMT400046694

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g112130.1.1	Tomato	cytosol	99.06	99.37
VIT_17s0000g09400.t01	Wine grape	cytosol	79.62	77.2
KRH57148	Soybean	cytosol	77.12	75.46
KRH03859	Soybean	cytosol	62.38	74.25
KRH54304	Soybean	cytosol	74.29	72.7
KRH63641	Soybean	cytosol	74.29	72.7
GSMUA_AchrUn_...	Banana	plastid	53.6	60.85
GSMUA_Achr10P...	Banana	cytosol	55.8	55.97
Zm00001d042425_P001	Maize	plastid	53.29	54.66
HORVU3Hr1G092470.1	Barley	plastid	52.04	52.7
TraesCS3A01G415900.1	Wheat	plastid	51.41	51.57
TraesCS3B01G451100.1	Wheat	plastid	51.72	51.56
EES04078	Sorghum	plastid	52.35	51.54
TraesCS3D01G411600.1	Wheat	plastid	51.72	50.93
Os01t0909400-01	Rice	cytosol, plastid	51.72	50.77
PGSC0003DMT400069001	Potato	plastid	43.89	45.45
PGSC0003DMT400006698	Potato	mitochondrion	41.69	43.18
Os05t0108400-01	Rice	cytosol	41.07	42.81
TraesCS1A01G026000.1	Wheat	cytosol	40.13	42.11
TraesCS1D01G026300.1	Wheat	cytosol	40.13	42.11
TraesCS1B01G032400.1	Wheat	cytosol	40.13	41.97
Zm00001d035694_P001	Maize	cytosol	38.24	40.13
PGSC0003DMT400057872	Potato	cytosol	37.3	39.8
PGSC0003DMT400077341	Potato	cytosol, peroxisome, plasma membrane	35.74	37.62
PGSC0003DMT400076600	Potato	cytosol	35.11	37.58
KXG21057	Sorghum	mitochondrion	40.13	33.42
PGSC0003DMT400018411	Potato	cytosol	30.72	32.34
PGSC0003DMT400006889	Potato	nucleus	14.42	30.07
PGSC0003DMT400068894	Potato	plastid	32.6	29.8
PGSC0003DMT400089872	Potato	cytosol, peroxisome, plastid	28.21	25.94

Protein Annotations

EnsemblPlants:PGSC0003DMT400046694	EnsemblPlantsGene:PGSC0003DMG400018128	EntrezGene:102586788	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF12
PFAM:PF05910	PGSC:PGSC0003DMG400018128	RefSeq:XP_006344483.1	RefSeq:XP_015162880.1	SEG:seg	UniParc:UPI00029596C7
UniProt:M1BJG6	MapMan:35.2	:	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400018128]

Coordinates

chr3:-:51889958..51891673

Molecular Weight (calculated)

36039.1 Da

IEP (calculated)

8.218

GRAVY (calculated)

-0.260

Length

319 amino acids

Sequence
(BLAST)

001: MMQDSIPACF SAGEKLSDDH AAVTRSGQSI FMSVYRTKIA DQCRLITVTW CKNLLLHGLS VSVDGSSGDG QYTCKVELKP WYFWRKQGSK HFLVDSKPVD
101: IFWDLKAAKF NGETEPSSEY YVAVVCDEEV ILLLGDLKKD AYRKTGCRPA LIEPILVSRK EHVFGKKKFS TRVKFHDKGR MHEISIECKN RINSSGISID
201: GVDPEMEIRI DGKLFIHVKH LQWKFRGNES IHLNKVRIEV YWDVHDWIFN PGLRHALFIF KPVLLSTSPS SVSELSSPPF SSSTSTPLSS QTGSSGSIEG
301: LNSNNSSDFC LFLYAWKVE

Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)

001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE

Arabidopsis Description

At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.