Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 98.04 | 51.02 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 56.21 | 28.57 |
| PGSC0003DMT400018411 | Potato | cytosol | 56.21 | 28.38 |
| KRH67854 | Soybean | cytosol | 56.86 | 28.25 |
| KRG96144 | Soybean | nucleus | 54.9 | 27.36 |
| GSMUA_Achr11P... | Banana | plastid | 43.14 | 22.76 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 43.14 | 22.37 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 41.83 | 21.77 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 42.48 | 21.31 |
| Bra023071.1-P | Field mustard | cytosol | 44.44 | 21.18 |
| CDX84556 | Canola | cytosol | 44.44 | 21.18 |
| CDX79683 | Canola | cytosol | 43.14 | 20.82 |
| AT2G36470.1 | Thale cress | nucleus | 44.44 | 20.8 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 38.56 | 20.49 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 40.52 | 20.26 |
| PGSC0003DMT400077341 | Potato | cytosol, peroxisome, plasma membrane | 37.25 | 18.81 |
| Os04t0407500-00 | Rice | cytosol, plastid | 30.72 | 18.8 |
| TraesCS5A01G130200.1 | Wheat | plastid | 38.56 | 18.73 |
| TraesCS5B01G130100.1 | Wheat | plastid | 38.56 | 18.61 |
| PGSC0003DMT400057872 | Potato | cytosol | 35.95 | 18.39 |
| TraesCS5D01G137700.1 | Wheat | plastid | 38.56 | 18.38 |
| HORVU5Hr1G041450.1 | Barley | plastid | 38.56 | 18.32 |
| Os12t0149000-01 | Rice | plastid | 36.6 | 17.07 |
| OQU82880 | Sorghum | plastid | 36.6 | 17.02 |
| TraesCS4A01G183900.1 | Wheat | plastid | 34.64 | 16.83 |
| TraesCS4B01G134800.1 | Wheat | plastid | 34.64 | 16.77 |
| Zm00001d004919_P001 | Maize | plastid | 35.29 | 16.72 |
| TraesCS4D01G129600.1 | Wheat | plastid | 34.64 | 16.67 |
| KXG22966 | Sorghum | plastid | 35.29 | 16.51 |
| Zm00001d052520_P001 | Maize | plastid | 33.99 | 16.3 |
| TraesCS7D01G277700.1 | Wheat | plastid | 30.72 | 15.56 |
| TraesCS7B01G175700.1 | Wheat | plastid | 30.72 | 15.56 |
| HORVU7Hr1G058790.3 | Barley | plastid | 30.72 | 15.51 |
| CDY33155 | Canola | cytosol | 40.52 | 15.5 |
| TraesCS7A01G277900.1 | Wheat | plastid | 30.07 | 15.49 |
| Zm00001d031962_P001 | Maize | plastid | 31.37 | 15.19 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 32.68 | 14.53 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 31.37 | 14.46 |
| PGSC0003DMT400046694 | Potato | cytosol | 30.07 | 14.42 |
| Zm00001d025337_P001 | Maize | cytosol | 32.03 | 14.2 |
| TraesCS2B01G308700.1 | Wheat | cytosol | 30.72 | 14.03 |
| TraesCS2A01G292300.1 | Wheat | cytosol | 30.07 | 13.57 |
| HORVU4Hr1G001870.2 | Barley | cytosol | 30.07 | 13.37 |
| PGSC0003DMT400006698 | Potato | mitochondrion | 26.8 | 13.31 |
| PGSC0003DMT400068894 | Potato | plastid | 30.07 | 13.18 |
| KXG26216 | Sorghum | cytosol | 32.03 | 13.14 |
| TraesCS4D01G010300.1 | Wheat | cytosol | 30.07 | 13.11 |
| TraesCS4B01G012200.1 | Wheat | cytosol | 30.07 | 13.03 |
| TraesCS4A01G302100.1 | Wheat | cytosol | 30.07 | 12.99 |
| PGSC0003DMT400069001 | Potato | plastid | 24.84 | 12.34 |
| PGSC0003DMT400089872 | Potato | cytosol, peroxisome, plastid | 27.45 | 12.1 |
| PGSC0003DMT400076600 | Potato | cytosol | 23.53 | 12.08 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400006889 | EnsemblPlantsGene:PGSC0003DMG400002672 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF16 | PFAM:PF05910 |
| PGSC:PGSC0003DMG400002672 | SEG:seg | UniParc:UPI000294B9D1 | UniProt:M0ZS39 | MapMan:35.2 | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002672]
Coordinates
chr9:+:3588092..3588553
Molecular Weight (calculated)
17785.2 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.471
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHEFELKKL NLDDKFSRFG LVSRNEHFSS SSVLVTKGKF SENGKCHDIL IKNSSSMLFV SIDKKSVIQV KRLQWNFRGN QTIFLDGLVV DFMWDVHDWL
101: CNPKSGCAMF MFRTRSGLDS RLWFDQEKNL EQNEEEEEKD GFSLMICATK SPD
101: CNPKSGCAMF MFRTRSGLDS RLWFDQEKNL EQNEEEEEKD GFSLMICATK SPD
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.