Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG31326 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27770.1 | KXG31326 | AT5G43320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025337_P001 | Maize | cytosol | 83.38 | 90.14 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 80.43 | 87.21 |
| TraesCS2B01G308700.1 | Wheat | cytosol | 71.85 | 80.0 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 71.05 | 79.82 |
| TraesCS2A01G292300.1 | Wheat | cytosol | 71.85 | 79.06 |
| Os04t0407500-00 | Rice | cytosol, plastid | 52.28 | 78.0 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 36.73 | 46.6 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 35.66 | 46.18 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 37.27 | 45.57 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 35.92 | 43.79 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 34.58 | 43.73 |
| GSMUA_Achr11P... | Banana | plastid | 31.1 | 40.0 |
| OQU82880 | Sorghum | plastid | 32.44 | 36.78 |
| KXG22966 | Sorghum | plastid | 32.17 | 36.7 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 28.95 | 35.88 |
| VIT_06s0061g01360.t01 | Wine grape | plastid | 28.15 | 35.12 |
| CDX79683 | Canola | cytosol | 29.22 | 34.38 |
| CDX84556 | Canola | cytosol | 29.49 | 34.27 |
| Bra023071.1-P | Field mustard | cytosol | 29.49 | 34.27 |
| KRH67854 | Soybean | cytosol | 27.88 | 33.77 |
| KRH26585 | Soybean | plastid | 27.08 | 33.55 |
| KRG96144 | Soybean | nucleus | 27.61 | 33.55 |
| KRH22720 | Soybean | plastid | 27.08 | 33.44 |
| PGSC0003DMT400006889 | Potato | nucleus | 13.14 | 32.03 |
| EER93250 | Sorghum | cytosol, plastid | 24.93 | 31.96 |
| CDX77134 | Canola | cytosol, plastid | 27.61 | 31.89 |
| KRH25175 | Soybean | cytosol | 27.08 | 31.86 |
| PGSC0003DMT400018411 | Potato | cytosol | 25.74 | 31.68 |
| AT2G36470.1 | Thale cress | nucleus | 27.61 | 31.5 |
| AT2G27770.1 | Thale cress | plastid | 26.81 | 31.25 |
| KRH30504 | Soybean | plastid | 26.81 | 30.77 |
| Bra034367.1-P | Field mustard | plastid | 26.54 | 30.46 |
| Solyc06g074500.1.1 | Tomato | cytosol | 24.66 | 30.36 |
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 23.86 | 30.27 |
| CDY30531 | Canola | plastid | 26.54 | 30.18 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 25.2 | 29.47 |
| OQU90135 | Sorghum | plastid | 24.93 | 27.35 |
| CDY33155 | Canola | cytosol | 29.22 | 27.25 |
| EES04078 | Sorghum | plastid | 23.32 | 26.85 |
| OQU84582 | Sorghum | cytosol | 20.91 | 24.3 |
| EER87970 | Sorghum | plastid | 22.52 | 23.4 |
| EES13906 | Sorghum | plastid | 23.86 | 21.29 |
| KXG21057 | Sorghum | mitochondrion | 21.18 | 20.63 |
| KXG35635 | Sorghum | plastid | 23.86 | 19.96 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A1B6PKM8 | InterPro:DUF868_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003844 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0005978 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0043169 |
| EnsemblPlants:KXG26216 | ProteinID:KXG26216 | ProteinID:KXG26216.2 | PFAM:PF05910 | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF16 |
| EnsemblPlantsGene:SORBI_3006G066300 | UniParc:UPI000B4242CC | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:42662100..42663221
Molecular Weight (calculated)
38646.9 Da
IEP (calculated)
7.571
GRAVY (calculated)
-0.114
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDLVSCFSE HAVRISDVAA CSGSGAANAA AAGGAPEAGG GGRAPAVSAV TTAYRSRLSA SGKELLIDVT WSRAPDGPAL SVAVHEAATA AAAAASRHHR
101: ASNAAAALRH LHKKKGSGTF TAGSCVVGVF WDYAAARYAD TAGAGAWAGP EPTSGFYVAV VADAEFVLLL GDLSRGYVDR LHGGIPIAGS RLARRRERFV
201: GCGCWSTRAR FLESGDEHEI GVVVRDGDAE AWVTVDGRKV VQLRRLRWNF RGSHTIFLDG GAPVDMTWDL HGWLFHAAGA AELPPHPSSS SSSSSSSCAV
301: FTFQARGASE TTKLWTDDDC FFAAADDDGE ETDKLPVTPS GGRRQKAGGG GGASSGQGFC LLIQGFRGFS KST
101: ASNAAAALRH LHKKKGSGTF TAGSCVVGVF WDYAAARYAD TAGAGAWAGP EPTSGFYVAV VADAEFVLLL GDLSRGYVDR LHGGIPIAGS RLARRRERFV
201: GCGCWSTRAR FLESGDEHEI GVVVRDGDAE AWVTVDGRKV VQLRRLRWNF RGSHTIFLDG GAPVDMTWDL HGWLFHAAGA AELPPHPSSS SSSSSSSCAV
301: FTFQARGASE TTKLWTDDDC FFAAADDDGE ETDKLPVTPS GGRRQKAGGG GGASSGQGFC LLIQGFRGFS KST
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.