CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045119_P001	Maize	plastid	86.91	88.89
Os06t0181800-00	Rice	plastid	67.41	68.95
TraesCS7A01G146000.1	Wheat	plastid	61.28	64.52
TraesCS7D01G147500.1	Wheat	plastid	61.0	55.73
TraesCS7B01G048400.1	Wheat	plastid	60.45	55.22
HORVU7Hr1G029920.1	Barley	mitochondrion	59.89	54.02
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	39.0	36.84
EES13906	Sorghum	plastid	41.78	35.89
GSMUA_Achr3P04550_001	Banana	plastid	26.46	35.71
KXG35635	Sorghum	plastid	42.9	34.53
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	36.49	33.68
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	37.05	32.68
KRH15788	Soybean	plastid	30.08	31.58
KRH05263	Soybean	mitochondrion, plastid	29.53	31.18
CDY51100	Canola	cytosol	28.13	29.71
CDX85733	Canola	cytosol, nucleus, plastid	28.13	29.45
Bra028555.1-P	Field mustard	nucleus	27.58	28.86
Solyc08g028780.1.1	Tomato	mitochondrion	27.02	28.61
KRH52365	Soybean	plastid	26.46	28.53
PGSC0003DMT400068894	Potato	plastid	27.58	28.37
KRH61697	Soybean	plastid	24.51	28.3
VIT_04s0008g05970.t01	Wine grape	plastid	28.41	27.49
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	28.97	26.8
CDX97072	Canola	nucleus	28.41	26.36
CDX69793	Canola	nucleus	27.58	26.33
CDX76763	Canola	plastid	25.07	25.79
AT5G11000.1	Thale cress	cytosol, plastid	27.58	25.45
Bra007811.1-P	Field mustard	plastid	24.79	25.43
CDY56275	Canola	cytosol	10.59	24.84
EER93250	Sorghum	cytosol, plastid	19.78	24.4
AT2G25200.1	Thale cress	plastid	23.96	24.29
KXG22966	Sorghum	plastid	22.01	24.16
OQU82880	Sorghum	plastid	21.73	23.71
EES04078	Sorghum	plastid	20.33	22.53
KXG26216	Sorghum	cytosol	23.4	22.52
KXG21057	Sorghum	mitochondrion	22.56	21.15
OQU90135	Sorghum	plastid	19.78	20.88
OQU84582	Sorghum	cytosol	18.66	20.87

Protein Annotations

EnsemblPlants:EER87970	EnsemblPlantsGene:SORBI_3010G064000	EntrezGene:8076199	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF8
PFAM:PF05910	ProteinID:EER87970	ProteinID:EER87970.1	RefSeq:XP_002436603.1	SEG:seg	UniParc:UPI0001A89189
UniProt:C5Z5H0	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:5062871..5064331

Molecular Weight (calculated)

38419.2 Da

IEP (calculated)

7.029

GRAVY (calculated)

-0.413

Length

359 amino acids

Sequence
(BLAST)

001: MPFPCFAAGA RGGGDPSVAA APSSSATSVY WTHLGGVTLT WSRAPIGLLL AAELRLAGDG GDDDTAPARF AFRPWLPWRR RGSKRFSAPG GRAVKFSWDL
101: SRARFAATGR RPEPVSRYSL HVSVDGELAL AVGDHASSAA GLLLSRRENA AVADDGRGEA YSTTVSVAGE RHDVSLAVEG STMWVAIDGE KALQVRRLRW
201: KFRGSERLDL PSGRRIRVTW DLHGWLFCPD AAAVFVLRFE TSDDADDEDD VDEDDDDGGG ASPHVQRQSS FSFRNHHQAH GGGGESWYSS DSDRRGWRRG
301: PFRSGSDTSP SVSVASTSAA SSAGSVATVS EWAAAEEAAA ALKDGGGFSL VVQLWKKRR

Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)

001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.