Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G147500.1 | Wheat | plastid | 96.18 | 96.18 |
| TraesCS7A01G146000.1 | Wheat | plastid | 82.95 | 95.6 |
| HORVU7Hr1G029920.1 | Barley | mitochondrion | 85.5 | 84.42 |
| Os06t0181800-00 | Rice | plastid | 56.74 | 63.53 |
| Zm00001d045119_P001 | Maize | plastid | 54.71 | 61.25 |
| EER87970 | Sorghum | plastid | 55.22 | 60.45 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 33.59 | 34.74 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 23.16 | 34.21 |
| TraesCS5B01G224600.1 | Wheat | plastid | 35.37 | 33.57 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 32.32 | 32.65 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 32.57 | 31.45 |
| CDY51100 | Canola | cytosol | 25.95 | 30.0 |
| KRH05263 | Soybean | mitochondrion, plastid | 25.19 | 29.12 |
| KRH15788 | Soybean | plastid | 25.19 | 28.95 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 24.94 | 28.57 |
| Bra028555.1-P | Field mustard | nucleus | 24.94 | 28.57 |
| PGSC0003DMT400068894 | Potato | plastid | 25.19 | 28.37 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 24.43 | 28.32 |
| KRH61697 | Soybean | plastid | 22.14 | 27.97 |
| KRH52365 | Soybean | plastid | 23.66 | 27.93 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 26.21 | 27.76 |
| TraesCS5B01G130100.1 | Wheat | plastid | 22.14 | 27.44 |
| TraesCS1B01G032400.1 | Wheat | cytosol | 20.87 | 26.89 |
| CDY56275 | Canola | cytosol | 10.18 | 26.14 |
| CDX97072 | Canola | nucleus | 25.7 | 26.1 |
| Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 25.45 | 25.77 |
| TraesCS4B01G134800.1 | Wheat | plastid | 20.61 | 25.63 |
| CDX69793 | Canola | nucleus | 24.43 | 25.53 |
| TraesCS7B01G175700.1 | Wheat | plastid | 19.59 | 25.5 |
| CDX76763 | Canola | plastid | 22.39 | 25.21 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 24.94 | 25.19 |
| TraesCS2B01G223900.1 | Wheat | plastid | 18.07 | 25.09 |
| AT2G25200.1 | Thale cress | plastid | 22.39 | 24.86 |
| TraesCS2B01G308700.1 | Wheat | cytosol | 20.87 | 24.48 |
| Bra007811.1-P | Field mustard | plastid | 21.63 | 24.29 |
| TraesCS4B01G012200.1 | Wheat | cytosol | 19.59 | 21.81 |
| TraesCS5B01G465500.1 | Wheat | plastid | 18.32 | 21.43 |
| TraesCS3B01G451100.1 | Wheat | plastid | 17.3 | 21.25 |
| TraesCS6B01G189500.1 | Wheat | cytosol | 16.29 | 20.51 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G048400.1 | EnsemblPlantsGene:TraesCS7B01G048400 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF8 | PFAM:PF05910 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:48339362..48340543
Molecular Weight (calculated)
42669.4 Da
IEP (calculated)
10.879
GRAVY (calculated)
-0.284
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANPVNLRQ APFPIKSPPR AHWRNNSRLH LRPSRPLKNQ SHHRLRVQRA YQMPLSCFAS GRADSSAAKA SSATSVYWTH LGAINLSWSR AALGLVLTVD
101: IGLAGAAAPA RFVLLPLLPW RRRGSKRFSG ASGHSVAFSW DLSRARLAPR RPEPLSGYFV LVSIDGELAL AAGDLQSSLP SPAASAGLLL SRRENAYPPG
201: CGGAYTTTVA VAGEEHEVSV AVEEAAMWVA VDGKRALQVR RLRWKFRGSE WLDLPRGGRS VRVTWDLHGW LFAPDAAAVF VLRFDTDGAN PVDDNDIEDG
301: DVGMHALRQN SFRSRHADSS GESDMKGSWR RVPFRTGSDS SPTVSVASTS AASSSAGSVA TVAEWVTAEE AELRDGGGGF SLIIYLWKKR RPR
101: IGLAGAAAPA RFVLLPLLPW RRRGSKRFSG ASGHSVAFSW DLSRARLAPR RPEPLSGYFV LVSIDGELAL AAGDLQSSLP SPAASAGLLL SRRENAYPPG
201: CGGAYTTTVA VAGEEHEVSV AVEEAAMWVA VDGKRALQVR RLRWKFRGSE WLDLPRGGRS VRVTWDLHGW LFAPDAAAVF VLRFDTDGAN PVDDNDIEDG
301: DVGMHALRQN SFRSRHADSS GESDMKGSWR RVPFRTGSDS SPTVSVASTS AASSSAGSVA TVAEWVTAEE AELRDGGGGF SLIIYLWKKR RPR
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.