Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76763 | Canola | plastid | 94.12 | 41.26 |
| Bra007811.1-P | Field mustard | plastid | 93.46 | 40.86 |
| AT2G25200.1 | Thale cress | plastid | 77.78 | 33.62 |
| CDY51100 | Canola | cytosol | 44.44 | 20.0 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 43.79 | 19.53 |
| CDX69793 | Canola | nucleus | 45.1 | 18.35 |
| CDX97072 | Canola | nucleus | 46.41 | 18.35 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 31.37 | 18.05 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 43.14 | 17.79 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 33.99 | 13.68 |
| CDY72112 | Canola | cytosol, peroxisome, plastid | 24.18 | 13.12 |
| TraesCS5A01G226100.1 | Wheat | plastid | 34.64 | 12.8 |
| TraesCS5B01G224600.1 | Wheat | plastid | 34.64 | 12.8 |
| TraesCS5D01G233300.1 | Wheat | plastid | 34.64 | 12.8 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 32.03 | 12.6 |
| CDY50761 | Canola | cytosol, peroxisome, plastid | 22.88 | 12.2 |
| Zm00001d050436_P001 | Maize | plastid | 31.37 | 11.76 |
| HORVU5Hr1G065520.1 | Barley | plastid | 34.64 | 11.73 |
| Zm00001d005752_P001 | Maize | plastid | 32.03 | 11.64 |
| KXG35635 | Sorghum | plastid | 33.33 | 11.44 |
| Zm00001d020470_P001 | Maize | plastid | 31.37 | 11.4 |
| Os08t0439600-00 | Rice | plastid | 30.07 | 11.33 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 30.07 | 11.3 |
| CDY52485 | Canola | plastid | 21.57 | 11.26 |
| CDX86191 | Canola | plastid | 21.57 | 11.26 |
| Os09t0416600-02 | Rice | plastid | 32.68 | 11.26 |
| TraesCS7A01G146000.1 | Wheat | plastid | 24.84 | 11.14 |
| Zm00001d032164_P001 | Maize | plastid | 29.41 | 11.14 |
| EES13906 | Sorghum | plastid | 30.07 | 11.0 |
| CDY00013 | Canola | cytosol, plastid | 20.91 | 10.85 |
| Os06t0181800-00 | Rice | plastid | 24.84 | 10.83 |
| Zm00001d045119_P001 | Maize | plastid | 24.84 | 10.83 |
| CDY30020 | Canola | cytosol, plastid | 19.61 | 10.64 |
| EER87970 | Sorghum | plastid | 24.84 | 10.59 |
| CDY00069 | Canola | plastid | 20.91 | 10.39 |
| Zm00001d037575_P001 | Maize | cytosol | 16.34 | 10.37 |
| CDY21108 | Canola | plastid | 18.95 | 10.28 |
| TraesCS7B01G048400.1 | Wheat | plastid | 26.14 | 10.18 |
| TraesCS7D01G147500.1 | Wheat | plastid | 26.14 | 10.18 |
| HORVU7Hr1G029920.1 | Barley | mitochondrion | 26.14 | 10.05 |
| CDY19961 | Canola | plastid | 19.61 | 9.8 |
| CDY30531 | Canola | plastid | 20.91 | 9.76 |
| CDY00849 | Canola | nucleus | 18.3 | 9.62 |
| CDY27882 | Canola | nucleus | 18.3 | 9.62 |
| CDX77134 | Canola | cytosol, plastid | 20.26 | 9.6 |
| CDY66553 | Canola | cytosol | 17.65 | 9.57 |
| CDX85324 | Canola | plastid | 16.99 | 9.35 |
| CDX82547 | Canola | cytosol | 17.65 | 9.28 |
| CDX86317 | Canola | plastid | 18.3 | 9.12 |
| CDY05690 | Canola | mitochondrion, plastid | 17.65 | 9.0 |
| CDY48744 | Canola | mitochondrion, plastid | 17.65 | 8.88 |
| CDX79683 | Canola | cytosol | 18.3 | 8.83 |
| CDX84556 | Canola | cytosol | 18.3 | 8.72 |
| CDY59819 | Canola | cytosol, mitochondrion, plasma membrane | 20.91 | 7.21 |
| CDY33155 | Canola | cytosol | 16.99 | 6.5 |
| Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 1.96 | 1.15 |
Protein Annotations
| EnsemblPlants:CDY56275 | EnsemblPlantsGene:GSBRNA2T00018036001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF3 | PFAM:PF05910 |
| ProteinID:CDY56275 | ProteinID:CDY56275.1 | UniParc:UPI0004EEB457 | UniProt:A0A078J0A9 | MapMan:35.2 | : |
Description
BnaA09g55790DBnaA09g55790D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078J0A9]
Coordinates
chrLK033474:+:2..2690
Molecular Weight (calculated)
17960.5 Da
IEP (calculated)
8.698
GRAVY (calculated)
-0.353
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: QIIIGIDVKV NDDDASLRFS VDNKSVLKIK QLQWKFRGNA KVVIDDVTIQ ISWDVYNWMF VDKDKANLVK VPAVFLLRFE NQEVEGNDVL MMKKRERDCV
101: VLGKENSRML SFRASSYGHW SSSVMEWSTC KEEDERSFGH KSWFSLVVYA WRK
101: VLGKENSRML SFRASSYGHW SSSVMEWSTC KEEDERSFGH KSWFSLVVYA WRK
001: MKISALGRGG SSPLSACFHP SATAINDDLP SALPSPSNPS YISTSGDATT TCQYHTNVGV FFLSWSRSFL RRSLHLHFYS CNSTNCYLHS LDCYRHSIPF
101: AFRLEIKPLT FWRKNGSKKL SRKPDIRVVW DLTHAKFGSG PDPESGFYVA VFVSGEVGLL VGGGNLKQRP RRQILVSKKE NLFGNRVYST KIMIQGKLRE
201: ISIDVKVVND DASLRFSVDD KSVLKISQLQ WKFRGNTKIV IDGVTIQISW DVFNWLFGGK DKVKPDKIPA VFLLRFENQE VEGNDVLMMN KRVRDDVILR
301: KENCRTPSFW ASTYSHWSSS RMSSVMEWSS CREEDERSFG SKSWFSLIIY AWRK
101: AFRLEIKPLT FWRKNGSKKL SRKPDIRVVW DLTHAKFGSG PDPESGFYVA VFVSGEVGLL VGGGNLKQRP RRQILVSKKE NLFGNRVYST KIMIQGKLRE
201: ISIDVKVVND DASLRFSVDD KSVLKISQLQ WKFRGNTKIV IDGVTIQISW DVFNWLFGGK DKVKPDKIPA VFLLRFENQE VEGNDVLMMN KRVRDDVILR
301: KENCRTPSFW ASTYSHWSSS RMSSVMEWSS CREEDERSFG SKSWFSLIIY AWRK
Arabidopsis Description
At2g25200 [Source:UniProtKB/TrEMBL;Acc:Q9SIS2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.