Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
- plastid 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 72.18 | 50.53 |
GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 57.14 | 39.07 |
GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 57.52 | 37.59 |
TraesCS5D01G233300.1 | Wheat | plastid | 53.38 | 34.3 |
TraesCS5B01G224600.1 | Wheat | plastid | 53.38 | 34.3 |
TraesCS5A01G226100.1 | Wheat | plastid | 53.01 | 34.06 |
Os08t0439600-00 | Rice | plastid | 51.5 | 33.74 |
Zm00001d050436_P001 | Maize | plastid | 51.5 | 33.58 |
Zm00001d020470_P001 | Maize | plastid | 52.26 | 33.02 |
Zm00001d032164_P001 | Maize | plastid | 50.0 | 32.92 |
EES13906 | Sorghum | plastid | 51.5 | 32.78 |
HORVU5Hr1G065520.1 | Barley | plastid | 53.38 | 31.42 |
KXG35635 | Sorghum | plastid | 52.63 | 31.39 |
CDY56275 | Canola | cytosol | 18.05 | 31.37 |
Zm00001d005752_P001 | Maize | plastid | 49.62 | 31.35 |
Os09t0416600-02 | Rice | plastid | 51.88 | 31.08 |
Os06t0181800-00 | Rice | plastid | 36.09 | 27.35 |
Zm00001d045119_P001 | Maize | plastid | 35.34 | 26.78 |
EER87970 | Sorghum | plastid | 35.71 | 26.46 |
KRH15788 | Soybean | plastid | 33.46 | 26.02 |
PGSC0003DMT400068894 | Potato | plastid | 33.83 | 25.79 |
Solyc08g028780.1.1 | Tomato | mitochondrion | 32.71 | 25.66 |
VIT_04s0008g05970.t01 | Wine grape | plastid | 35.71 | 25.61 |
CDY51100 | Canola | cytosol | 32.71 | 25.59 |
TraesCS7A01G146000.1 | Wheat | plastid | 32.71 | 25.51 |
KRH52365 | Soybean | plastid | 31.58 | 25.23 |
CDX85733 | Canola | cytosol, nucleus, plastid | 31.95 | 24.78 |
KRH05263 | Soybean | mitochondrion, plastid | 31.58 | 24.71 |
Bra028555.1-P | Field mustard | nucleus | 31.58 | 24.49 |
KRH61697 | Soybean | plastid | 27.82 | 23.79 |
Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 34.59 | 23.71 |
CDX69793 | Canola | nucleus | 33.46 | 23.67 |
CDX97072 | Canola | nucleus | 34.21 | 23.51 |
TraesCS7B01G048400.1 | Wheat | plastid | 34.21 | 23.16 |
TraesCS7D01G147500.1 | Wheat | plastid | 33.83 | 22.9 |
HORVU7Hr1G029920.1 | Barley | mitochondrion | 34.21 | 22.86 |
AT5G11000.1 | Thale cress | cytosol, plastid | 32.71 | 22.36 |
Zm00001d037575_P001 | Maize | cytosol | 19.17 | 21.16 |
CDX76763 | Canola | plastid | 26.69 | 20.34 |
AT2G25200.1 | Thale cress | plastid | 26.32 | 19.77 |
Bra007811.1-P | Field mustard | plastid | 25.94 | 19.71 |
GSMUA_Achr8P07610_001 | Banana | cytosol | 19.92 | 18.4 |
GSMUA_Achr2P20270_001 | Banana | cytosol | 21.05 | 18.3 |
GSMUA_Achr5P24690_001 | Banana | cytosol | 19.92 | 18.28 |
GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 18.05 | 18.18 |
GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 17.67 | 18.01 |
GSMUA_Achr8P29560_001 | Banana | nucleus | 19.55 | 17.63 |
Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 16.17 | 16.54 |
GSMUA_Achr3P03050_001 | Banana | nucleus | 18.05 | 16.33 |
GSMUA_Achr10P... | Banana | nucleus, plastid | 18.42 | 16.07 |
GSMUA_Achr11P... | Banana | plastid | 17.29 | 15.86 |
GSMUA_AchrUn_... | Banana | plastid | 16.17 | 15.3 |
GSMUA_Achr10P... | Banana | cytosol | 18.05 | 15.09 |
GSMUA_AchrUn_... | Banana | cytosol | 15.04 | 14.34 |
GSMUA_Achr3P12010_001 | Banana | cytosol | 11.28 | 10.87 |
Protein Annotations
EnsemblPlants:GSMUA_Achr3P04550_001 | EnsemblPlants:GSMUA_Achr3T04550_001 | EnsemblPlantsGene:GSMUA_Achr3G04550_001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF14 |
PFAM:PF05910 | SEG:seg | UniParc:UPI000294ADB7 | UniProt:M0SBS3 | MapMan:35.2 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G04550_001]
Coordinates
chr3:+:2941262..2942446
Molecular Weight (calculated)
28623.4 Da
IEP (calculated)
7.640
GRAVY (calculated)
-0.512
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEAVPACFR GGAAGGPPPS TAAGPSLTTS VYETHLGLAA LSWSRTVLGL SLRAVLRLSG DDEEEEEEEE LLRFRIRPEV AMSVGIDGER VLQVRRLRWK
101: FRGSETVEVG GGVGRIQVSW DLHNWFFQSK DDATAPPPAA GAAELGHAVF VLRFEGAEER KQQAEGHSGK GIGKEEGHLR NAMCKSPAAR GYNGKNRHGD
201: WNDTSSGGVD KRRGRKNSLR KTSSSSSSTS SVSSASTSTV LEWASAEEVE LQRAHGFSLL VYACKS
101: FRGSETVEVG GGVGRIQVSW DLHNWFFQSK DDATAPPPAA GAAELGHAVF VLRFEGAEER KQQAEGHSGK GIGKEEGHLR NAMCKSPAAR GYNGKNRHGD
201: WNDTSSGGVD KRRGRKNSLR KTSSSSSSTS SVSSASTSTV LEWASAEEVE LQRAHGFSLL VYACKS
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.