Factsheet for Os08t0439600-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13906	Sorghum	plastid	79.31	77.03
Zm00001d050436_P001	Maize	plastid	77.09	76.72
Zm00001d032164_P001	Maize	plastid	75.62	75.99
Os09t0416600-02	Rice	plastid	66.5	60.81
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	48.28	51.58
GSMUA_Achr3P04550_001	Banana	plastid	33.74	51.5
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	31.28	48.85
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	45.57	47.56
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	43.84	43.73
Os06t0181800-00	Rice	plastid	36.21	41.88
Solyc08g028780.1.1	Tomato	mitochondrion	32.76	39.23
PGSC0003DMT400068894	Potato	plastid	33.25	38.68
VIT_04s0008g05970.t01	Wine grape	plastid	33.5	36.66
KRH52365	Soybean	plastid	30.05	36.64
CDX85733	Canola	cytosol, nucleus, plastid	30.79	36.44
CDY51100	Canola	cytosol	30.3	36.18
CDX69793	Canola	nucleus	33.25	35.9
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	34.24	35.82
CDX97072	Canola	nucleus	33.99	35.66
Bra028555.1-P	Field mustard	nucleus	30.05	35.57
KRH61697	Soybean	plastid	26.11	34.08
AT5G11000.1	Thale cress	cytosol, plastid	32.02	33.42
KRH15788	Soybean	plastid	28.08	33.33
KRH05263	Soybean	mitochondrion, plastid	27.59	32.94
CDX76763	Canola	plastid	26.11	30.37
AT2G25200.1	Thale cress	plastid	26.35	30.23
CDY56275	Canola	cytosol	11.33	30.07
Bra007811.1-P	Field mustard	plastid	25.62	29.71
Os05t0108400-01	Rice	cytosol	21.92	29.09
Os01t0909400-01	Rice	cytosol, plastid	23.15	28.92
Os04t0407500-00	Rice	cytosol, plastid	17.49	28.4
Os12t0149000-01	Rice	plastid	22.91	28.35
Os07t0572300-01	Rice	plastid	19.21	27.46
Os03t0806700-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	19.46	27.15
Os02t0198800-01	Rice	cytosol, nucleus	21.67	23.66

Protein Annotations

EnsemblPlants:Os08t0439600-00	EnsemblPlantsGene:Os08g0439600	EntrezGene:4345678	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF14
PFAM:PF05910	ProteinID:BAD09882.1	ProteinID:BAF23812.1	ProteinID:BAT05614.1	ProteinID:EAZ42872.1	RefSeq:XP_015650147.1
RefSeq:XP_015650148.1	SEG:seg	UniParc:UPI000023AF5E	UniProt:Q6Z9I5	MapMan:35.2	:

Description

Protein of unknown function DUF868, plant family protein. (Os08t0439600-00)

Coordinates

chr8:+:21393334..21394802

Molecular Weight (calculated)

44033.6 Da

IEP (calculated)

11.223

GRAVY (calculated)

-0.456

Length

406 amino acids

Sequence
(BLAST)

001: MPSAIAACFR CAPSAAAAAS AASGPAGPSL ATSVYETHLG LAALSWTRTS LGLSLRAVLR LSSPATAASV GTCFDEDADE ETLAFRVRPW LLWRRRGTRR
101: FRAAGDRRVD LAWDLTRARF PGSGSPEPSS GFFVAVVVDG EMVLAAGDLS DAAYRRTRAR RPAGPRPVLL SRREHVAMRD AGRGGRGHRS WVTVRGKERE
201: ISVDLVSRGR GRDTGSSGSS SREKDRADVG LSVSIDGERV LHVRRLRWKF RGSERVDLGG GDRVQLSWDL HNWLFPQREP PTTDAAAHAH AHAVFVFRFD
301: LGGGGEEASE HAKALCDKAP RRDAAGILRG YFARWGQKDW SETGSERRKR GRGRRLAKAS SSSSASVASS TASWASGSTV MDWASPEEAE MQRGDGFSLL
401: IYAWKS

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.