CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2
extracellular 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61697	Soybean	plastid	85.29	91.32
KRH05263	Soybean	mitochondrion, plastid	54.65	53.53
KRH15788	Soybean	plastid	53.75	52.34
PGSC0003DMT400068894	Potato	plastid	53.15	50.72
Solyc08g028780.1.1	Tomato	mitochondrion	48.95	48.08
CDY51100	Canola	cytosol	44.44	43.53
CDX85733	Canola	cytosol, nucleus, plastid	44.74	43.44
CDX69793	Canola	nucleus	48.05	42.55
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	49.55	42.53
CDX97072	Canola	nucleus	49.25	42.38
Bra028555.1-P	Field mustard	nucleus	43.24	41.98
AT5G11000.1	Thale cress	cytosol, plastid	48.95	41.9
KRH68710	Soybean	plastid	31.23	35.02
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	38.74	33.95
KRG92651	Soybean	cytosol	30.33	33.67
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	30.33	33.55
KRG96949	Soybean	cytosol, plastid	30.33	33.01
Zm00001d032164_P001	Maize	plastid	39.34	32.43
Zm00001d050436_P001	Maize	plastid	39.64	32.35
KRG95548	Soybean	cytosol	29.13	32.23
TraesCS5B01G224600.1	Wheat	plastid	39.64	31.88
TraesCS5A01G226100.1	Wheat	plastid	39.34	31.64
EES13906	Sorghum	plastid	39.64	31.58
GSMUA_Achr3P04550_001	Banana	plastid	25.23	31.58
KRH71412	Soybean	cytosol	28.53	31.56
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	38.44	31.45
TraesCS5D01G233300.1	Wheat	plastid	39.04	31.4
Zm00001d020470_P001	Maize	plastid	39.64	31.35
KRG96948	Soybean	plastid	29.13	31.09
KRH32026	Soybean	cytosol, plastid	27.93	31.0
KRH16994	Soybean	cytosol	28.23	30.82
KRH68709	Soybean	plastid	28.23	30.82
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	35.74	30.59
KRH72631	Soybean	cytosol	27.93	30.29
Os08t0439600-00	Rice	plastid	36.64	30.05
Zm00001d005752_P001	Maize	plastid	37.84	29.93
KRH67230	Soybean	cytosol	27.93	29.71
KRG92733	Soybean	plastid	29.43	29.61
HORVU5Hr1G065520.1	Barley	plastid	39.64	29.2
KXG35635	Sorghum	plastid	38.74	28.92
KRH26585	Soybean	plastid	26.13	28.9
Os09t0416600-02	Rice	plastid	38.44	28.83
KRH22720	Soybean	plastid	26.13	28.81
KRH63641	Soybean	cytosol	27.93	28.53
KRH54304	Soybean	cytosol	27.63	28.22
KRH34068	Soybean	plastid	27.93	28.1
Zm00001d045119_P001	Maize	plastid	29.43	27.92
KRH57148	Soybean	cytosol	27.03	27.61
TraesCS7A01G146000.1	Wheat	plastid	27.63	26.98
KRH25175	Soybean	cytosol	25.53	26.81
KRG90008	Soybean	plastid	25.23	26.67
EER87970	Sorghum	plastid	28.53	26.46
Os06t0181800-00	Rice	plastid	27.33	25.93
KRH67854	Soybean	cytosol	23.72	25.65
KRH03859	Soybean	cytosol	20.42	25.37
KRH30504	Soybean	plastid	24.62	25.23
KRH14191	Soybean	cytosol	23.12	24.76
KRG96144	Soybean	nucleus	22.52	24.43
TraesCS7B01G048400.1	Wheat	plastid	27.93	23.66
TraesCS7D01G147500.1	Wheat	plastid	27.93	23.66
HORVU7Hr1G029920.1	Barley	mitochondrion	27.03	22.61
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	13.21	16.92
Zm00001d037575_P001	Maize	cytosol	12.01	16.6

Protein Annotations

EMBL:ACUP02003419	EnsemblPlants:KRH52365	EnsemblPlantsGene:GLYMA_06G063900	EntrezGene:100783731	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF3	PFAM:PF05910	ProteinID:KRH52365	ProteinID:KRH52365.1	SEG:seg	UniParc:UPI0002339FF8
UniProt:I1K8Q1	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:4856144..4857690

Molecular Weight (calculated)

37513.3 Da

IEP (calculated)

9.065

GRAVY (calculated)

-0.396

Length

333 amino acids

Sequence
(BLAST)

001: MMSSSPFPSC FRPSPTTESQ PPPPPPPPHS TISNLTIYHT DTGPVSLTWS RSIVGRSLHI QLHQNQNPLD SPPYPNPTTL SFHHHIRPFL FWKKHGSKKL
101: APDTFLFWNL SRAKFGAAPE PLSGFYVALV VHNHMTLLIG DSTKDAFSKS KARHPNTPQL LLLKKEHVFA DRLYTTRATF GGKAREIQID CGYHDHSRLC
201: FSVDGEKVLQ IKRLKWKFRG NERVQVDGVH VQISWDLYNW LFDKNNNSAA DAHAIFMFKF EEDEVEAVGD RNNVVGLWNL GVSEWGKTWS SSSLSSSGGS
301: FGGSSSVLEW SSVEENELVV PVGFSLLVYA WKR

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.