CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68709	Soybean	plastid	86.86	88.85
KRH34068	Soybean	plastid	67.95	64.05
VIT_14s0030g01700.t01	Wine grape	plastid	65.38	62.58
KRG92733	Soybean	plastid	66.35	62.54
PGSC0003DMT400089872	Potato	cytosol, peroxisome, plastid	61.86	55.62
Solyc01g097830.2.1	Tomato	cytosol, nucleus, peroxisome	60.58	54.62
KRH32026	Soybean	cytosol, plastid	31.09	32.33
KRH68710	Soybean	plastid	29.81	31.31
KRH71412	Soybean	cytosol	30.13	31.23
KRG95548	Soybean	cytosol	29.81	30.9
KRH15788	Soybean	plastid	33.33	30.41
KRH05263	Soybean	mitochondrion, plastid	33.01	30.29
KRH22720	Soybean	plastid	29.17	30.13
KRG96949	Soybean	cytosol, plastid	29.49	30.07
KRH52365	Soybean	plastid	31.09	29.13
KRH26585	Soybean	plastid	27.88	28.9
KRG92651	Soybean	cytosol	27.56	28.67
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	27.56	28.57
KRH25175	Soybean	cytosol	28.53	28.08
KRH67230	Soybean	cytosol	27.88	27.8
KRH61697	Soybean	plastid	27.56	27.65
KRH30504	Soybean	plastid	27.88	26.77
KRH57148	Soybean	cytosol	27.88	26.69
KRH03859	Soybean	cytosol	22.44	26.12
KRH54304	Soybean	cytosol	27.24	26.07
KRH63641	Soybean	cytosol	26.92	25.77
KRH67854	Soybean	cytosol	25.32	25.65
KRG96144	Soybean	nucleus	24.36	24.76
KRH14191	Soybean	cytosol	23.72	23.79
KRG90008	Soybean	plastid	22.76	22.54
KRH16994	Soybean	cytosol	21.15	21.64
KRH72631	Soybean	cytosol	21.15	21.5

Protein Annotations

EMBL:ACUP02012169	EnsemblPlants:KRG96948	EnsemblPlantsGene:GLYMA_19G243100	EntrezGene:100780249	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF6	PFAM:PF05910	ProteinID:KRG96948	ProteinID:KRG96948.1	SEG:seg	UniParc:UPI000233EB85
UniProt:I1NC75	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:49067769..49069142

Molecular Weight (calculated)

35130.7 Da

IEP (calculated)

9.693

GRAVY (calculated)

-0.174

Length

312 amino acids

Sequence
(BLAST)

001: MISGCFSQPN TPSSSNISYS SQVPQNVVTC TYLTQLCNSP TYLTLSWSRT LFSHSLTISA TDIFSITISL NSSTFFFRTR HGSKSINNRK IKLHWNFTRA
101: EFIQNSAEPE SRFYLAISHN GKLQFFLGDL VRDLTRRHKK LDVKANNVVD PVLVSRREHV FGRRCYVSRA VFMGSKHVIE IECGGGVLGV KVDGETRLVV
201: KRLAWKFRGY EKIFIDGVEV EFYWDVLSWV VNRDSNNGHG VFVFQVGDGT VWPEMVGAEK KLMNKSVSSA SSVLQWAEET SECGRTSSSS STKFSGTNAT
301: GFSLLLYAWT FN

Best Arabidopsis Sequence Match ( AT3G04860.1 )
(BLAST)

001: MRDFPSCSGE NGVQIADSSS SSSAGRNAQN LVICIYRCRI RGRTCLITVT WTKNLMGQCV TVGVDDSCNR SLCKVEIKPW LFTKRKGSKT LEAYACNIDV
101: FWDLSSAKFG SSPEPLGGFY VGVVVDKEMV LLLGDMKKEA FKKTNAAPSS SLGAVFIAKK EHVFGKRTFA TKAQFSGDGK THDLVIECDT SLSDPCLIVR
201: VDGKILMQVQ RLHWKFRGND TIIVNRISVE VLWDVHSWFF GLPSSPGNAV FMFRTCQSVE KTWSFTQVPT SSKSQSFGFS LILYAWKNE

Arabidopsis Description

AT3g04860/T9J14_19 [Source:UniProtKB/TrEMBL;Acc:Q9CAV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.