CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30504	Soybean	plastid	93.38	91.08
KRH22720	Soybean	plastid	72.56	76.16
KRH26585	Soybean	plastid	72.24	76.08
VIT_06s0061g01360.t01	Wine grape	plastid	65.93	69.9
Solyc06g074500.1.1	Tomato	cytosol	58.68	61.39
PGSC0003DMT400018411	Potato	cytosol	58.04	60.73
CDX77134	Canola	cytosol, plastid	56.78	55.73
AT2G27770.1	Thale cress	plastid	56.15	55.62
Bra034367.1-P	Field mustard	plastid	56.78	55.38
CDY30531	Canola	plastid	55.84	53.96
KRH67854	Soybean	cytosol	48.27	49.68
KRG96144	Soybean	nucleus	47.63	49.19
Solyc11g066930.1.1	Tomato	nucleus, plastid	48.9	48.59
GSMUA_Achr8P29560_001	Banana	nucleus	40.38	43.39
GSMUA_Achr10P...	Banana	nucleus, plastid	41.01	42.62
GSMUA_Achr3P03050_001	Banana	nucleus	39.43	42.52
GSMUA_Achr11P...	Banana	plastid	37.54	41.03
GSMUA_Achr2P20270_001	Banana	cytosol	39.12	40.52
KRH68710	Soybean	plastid	37.54	40.07
KRG96949	Soybean	cytosol, plastid	37.85	39.22
GSMUA_Achr8P07610_001	Banana	cytosol	35.33	38.89
KRH32026	Soybean	cytosol, plastid	36.59	38.67
KRG95548	Soybean	cytosol	35.65	37.54
KRH71412	Soybean	cytosol	35.65	37.54
KRG92651	Soybean	cytosol	34.38	36.33
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	34.07	35.88
KRH67230	Soybean	cytosol	34.7	35.14
TraesCS7A01G277900.1	Wheat	plastid	30.6	32.66
TraesCS7D01G277700.1	Wheat	plastid	30.91	32.45
TraesCS7B01G175700.1	Wheat	plastid	30.28	31.79
HORVU7Hr1G058790.3	Barley	plastid	30.28	31.68
Zm00001d052520_P001	Maize	plastid	31.55	31.35
TraesCS2B01G308700.1	Wheat	cytosol	32.81	31.04
TraesCS2D01G290200.1	Wheat	cytosol	32.49	31.02
OQU82880	Sorghum	plastid	32.18	31.0
TraesCS5B01G130100.1	Wheat	plastid	30.28	30.28
TraesCS2A01G292300.1	Wheat	cytosol	32.18	30.09
Zm00001d004919_P001	Maize	plastid	30.6	30.03
Os12t0149000-01	Rice	plastid	30.91	29.88
TraesCS5A01G130200.1	Wheat	plastid	29.65	29.84
KXG22966	Sorghum	plastid	30.6	29.66
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	32.18	29.65
Os04t0407500-00	Rice	cytosol, plastid	23.34	29.6
KRH68709	Soybean	plastid	28.39	29.51
Zm00001d031962_P001	Maize	plastid	29.34	29.43
TraesCS5D01G137700.1	Wheat	plastid	29.65	29.28
TraesCS4A01G183900.1	Wheat	plastid	29.02	29.21
HORVU5Hr1G041450.1	Barley	plastid	29.65	29.19
TraesCS4B01G134800.1	Wheat	plastid	29.02	29.11
KRH57148	Soybean	cytosol	29.65	28.83
KRH03859	Soybean	cytosol	24.29	28.73
Zm00001d025337_P001	Maize	cytosol	31.23	28.7
KRG96948	Soybean	plastid	28.08	28.53
TraesCS4D01G129600.1	Wheat	plastid	28.08	27.99
KRG92733	Soybean	plastid	28.71	27.49
KRH34068	Soybean	plastid	28.71	27.49
KXG26216	Sorghum	cytosol	31.86	27.08
KRH54304	Soybean	cytosol	27.76	26.99
KRH63641	Soybean	cytosol	27.76	26.99
KRH16994	Soybean	cytosol	25.87	26.89
KRH72631	Soybean	cytosol	25.55	26.38
KRG90008	Soybean	plastid	25.87	26.03
HORVU4Hr1G001870.2	Barley	cytosol	28.08	25.87
KRH52365	Soybean	plastid	26.81	25.53
TraesCS4B01G012200.1	Wheat	cytosol	28.39	25.5
TraesCS4A01G302100.1	Wheat	cytosol	28.39	25.42
TraesCS4D01G010300.1	Wheat	cytosol	27.44	24.79
KRH61697	Soybean	plastid	23.97	24.44
KRH15788	Soybean	plastid	25.24	23.39
KRH14191	Soybean	cytosol	22.4	22.83
KRH05263	Soybean	mitochondrion, plastid	23.97	22.35

Protein Annotations

EMBL:ACUP02007219	EnsemblPlants:KRH25175	EnsemblPlantsGene:GLYMA_12G086000	EntrezGene:100794621	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF10	PFAM:PF05910	PFscan:PS51257	ProteinID:KRH25175	ProteinID:KRH25175.1	SEG:seg
UniParc:UPI000233C2A5	UniProt:I1LRD1	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:6951149..6952851

Molecular Weight (calculated)

35714.3 Da

IEP (calculated)

7.915

GRAVY (calculated)

-0.238

Length

317 amino acids

Sequence
(BLAST)

001: MRDIVSCFSE NAVNVSHSSI SCSSYSHNAC ISPSSIVVPS TQNSISSVYK LVLSTLKQVL VTVTWCRSHS NQGLTITFND EDPPLFRLNT NSRFFRKKKG
101: SKILESSDSS SSKVEILWDL SSAKYESGPE PVQGFHVVII IDSEIGLVLG DTAAEEIVSK RQNFKSNNNN NTPLAKVSLL SRREHCSGNT LYTTKAQFCD
201: TGTWHDVMIR CSVENENEGL FKSPVLCVCI DKKTVIRVKR LQWNFRGNQT IFVDGLLVDL LWDVHDWFFN PSSSGYAVFM FRTRSGMDSR LWFEEKNAHK
301: DKDSVEFSLL IYACKTS

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.