CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96948	Soybean	plastid	88.85	86.86
VIT_14s0030g01700.t01	Wine grape	plastid	66.23	61.96
KRH34068	Soybean	plastid	65.57	60.42
KRG92733	Soybean	plastid	64.26	59.21
PGSC0003DMT400089872	Potato	cytosol, peroxisome, plastid	61.31	53.89
Solyc01g097830.2.1	Tomato	cytosol, nucleus, peroxisome	59.67	52.6
KRH32026	Soybean	cytosol, plastid	30.49	31.0
KRH22720	Soybean	plastid	30.16	30.46
KRH68710	Soybean	plastid	29.18	29.97
KRG95548	Soybean	cytosol	29.51	29.9
KRH71412	Soybean	cytosol	29.51	29.9
KRH26585	Soybean	plastid	29.18	29.57
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	28.52	28.9
KRG96949	Soybean	cytosol, plastid	28.85	28.76
KRG92651	Soybean	cytosol	28.2	28.67
KRH25175	Soybean	cytosol	29.51	28.39
KRH15788	Soybean	plastid	31.8	28.36
KRH05263	Soybean	mitochondrion, plastid	31.48	28.24
KRH52365	Soybean	plastid	30.82	28.23
KRH67230	Soybean	cytosol	27.87	27.16
KRH30504	Soybean	plastid	28.85	27.08
KRH61697	Soybean	plastid	27.21	26.69
KRH67854	Soybean	cytosol	26.89	26.62
KRH03859	Soybean	cytosol	22.95	26.12
KRH57148	Soybean	cytosol	27.54	25.77
KRH54304	Soybean	cytosol	27.21	25.46
KRH63641	Soybean	cytosol	27.21	25.46
KRG96144	Soybean	nucleus	25.57	25.41
KRH14191	Soybean	cytosol	24.26	23.79
KRG90008	Soybean	plastid	23.61	22.86
KRH16994	Soybean	cytosol	22.62	22.62
KRH72631	Soybean	cytosol	22.62	22.48

Protein Annotations

EMBL:ACUP02002123	EnsemblPlants:KRH68709	EnsemblPlantsGene:GLYMA_03G245600	EntrezGene:100794933	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF6	PFAM:PF05910	ProteinID:KRH68709	ProteinID:KRH68709.1	SEG:seg	UniParc:UPI00023377BE
UniProt:I1JRL5	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:44280720..44282443

Molecular Weight (calculated)

34365.0 Da

IEP (calculated)

9.860

GRAVY (calculated)

-0.189

Length

305 amino acids

Sequence
(BLAST)

001: MIAGCFSQPN TPSSSSSSSS SSQVPQNLIT CIYKTQLCNS PTYLTLSWSK TLFSHSLTIS ATDIFSITIS LNSSTFSFFR RRQGSKSINK RKIKLHWNFT
101: RAEFIQNSAE PESRFYLAIS HNDKLQFFLG DLLRDLNRRN KRVDVEANNV VDPVLLSRRE HVFGRRCYVS RAVFMGSKHV IEIECGGGVL GVKVDGETRL
201: VVKRLAWKFR GYEKIFINGV QVEFYWDVLS WVVNSNKGNG HGVFVFQVGD GTVWPEMVGA EKKLMNKSVS ASSVLQWPED TCDCGRTSGT NATGFSFLLY
301: AWTIN

Best Arabidopsis Sequence Match ( AT3G04860.1 )
(BLAST)

001: MRDFPSCSGE NGVQIADSSS SSSAGRNAQN LVICIYRCRI RGRTCLITVT WTKNLMGQCV TVGVDDSCNR SLCKVEIKPW LFTKRKGSKT LEAYACNIDV
101: FWDLSSAKFG SSPEPLGGFY VGVVVDKEMV LLLGDMKKEA FKKTNAAPSS SLGAVFIAKK EHVFGKRTFA TKAQFSGDGK THDLVIECDT SLSDPCLIVR
201: VDGKILMQVQ RLHWKFRGND TIIVNRISVE VLWDVHSWFF GLPSSPGNAV FMFRTCQSVE KTWSFTQVPT SSKSQSFGFS LILYAWKNE

Arabidopsis Description

AT3g04860/T9J14_19 [Source:UniProtKB/TrEMBL;Acc:Q9CAV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.