Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 1
- mitochondrion 2
- peroxisome 1
- plastid 1
- plasma membrane 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G04860.1 | KRG99083 | AT1G05410.1 | 21798944 |
AT3G04860.1 | KRH27646 | AT1G05410.1 | 21798944 |
AT3G04860.1 | KRH77849 | AT1G05410.1 | 21798944 |
AT3G04860.1 | KRG95394 | AT2G19650.1 | 21798944 |
AT3G04860.1 | KRH67075 | AT2G19650.1 | 21798944 |
AT3G04860.1 | KRH05183 | AT4G32190.1 | 21798944 |
AT3G04860.1 | KRH15859 | AT4G32190.1 | 21798944 |
AT5G28150.1 | KRH12426 | AT4G26100.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG92651 | Soybean | cytosol | 95.02 | 95.33 |
KRH68710 | Soybean | plastid | 78.07 | 79.12 |
KRG96949 | Soybean | cytosol, plastid | 79.07 | 77.78 |
VIT_14s0030g01760.t01 | Wine grape | cytosol, plastid | 72.43 | 76.49 |
Solyc01g097790.2.1 | Tomato | cytosol | 70.43 | 70.9 |
PGSC0003DMT400057872 | Potato | cytosol | 70.43 | 70.9 |
Bra009991.1-P | Field mustard | plastid | 67.11 | 68.94 |
CDX86191 | Canola | plastid | 67.11 | 68.94 |
CDY52485 | Canola | plastid | 67.11 | 68.94 |
AT5G28150.1 | Thale cress | cytosol, plastid | 64.12 | 66.78 |
CDY00013 | Canola | cytosol, plastid | 65.45 | 66.78 |
KRG95548 | Soybean | cytosol | 66.45 | 66.45 |
AT3G04860.1 | Thale cress | plastid | 63.46 | 66.09 |
GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 56.48 | 65.13 |
KRH71412 | Soybean | cytosol | 64.78 | 64.78 |
GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 56.48 | 64.39 |
GSMUA_Achr5P24690_001 | Banana | cytosol | 61.79 | 64.14 |
KRH32026 | Soybean | cytosol, plastid | 63.79 | 64.0 |
CDY72112 | Canola | cytosol, peroxisome, plastid | 59.14 | 63.12 |
CDY50761 | Canola | cytosol, peroxisome, plastid | 59.8 | 62.72 |
Bra040410.1-P | Field mustard | cytosol, nucleus, peroxisome | 59.47 | 62.59 |
HORVU5Hr1G109570.1 | Barley | cytosol, plastid | 60.47 | 62.33 |
EER93250 | Sorghum | cytosol, plastid | 60.13 | 62.2 |
TraesCS5A01G456500.1 | Wheat | plastid | 60.13 | 61.99 |
Os03t0806700-01 | Rice | cytosol, endoplasmic reticulum, peroxisome, plastid | 59.8 | 61.86 |
Zm00001d013042_P001 | Maize | plastid | 59.8 | 61.86 |
KRH67230 | Soybean | cytosol | 64.12 | 61.66 |
Bra040118.1-P | Field mustard | plastid | 56.48 | 60.28 |
Zm00001d034527_P001 | Maize | plastid | 58.8 | 60.2 |
CDY21108 | Canola | plastid | 56.15 | 59.93 |
CDY30020 | Canola | cytosol, plastid | 55.81 | 59.57 |
TraesCS5D01G467300.1 | Wheat | cytosol, plastid | 59.8 | 58.44 |
Os07t0572300-01 | Rice | plastid | 51.49 | 54.58 |
TraesCS5B01G465500.1 | Wheat | plastid | 60.13 | 53.87 |
HORVU2Hr1G038060.1 | Barley | plastid | 49.17 | 52.86 |
Zm00001d021869_P001 | Maize | plastid | 48.51 | 51.41 |
TraesCS2D01G204300.1 | Wheat | plastid | 48.17 | 51.24 |
TraesCS2B01G223900.1 | Wheat | plastid | 48.17 | 51.24 |
Bra036119.1-P | Field mustard | mitochondrion | 64.78 | 51.05 |
TraesCS2A01G196200.1 | Wheat | plastid | 46.84 | 49.82 |
OQU90135 | Sorghum | plastid | 50.5 | 44.71 |
CDY59819 | Canola | cytosol, mitochondrion, plasma membrane | 65.12 | 44.14 |
KRH26585 | Soybean | plastid | 38.21 | 38.21 |
KRH22720 | Soybean | plastid | 38.21 | 38.08 |
KRH03859 | Soybean | cytosol | 31.89 | 35.82 |
KRH57148 | Soybean | cytosol | 38.54 | 35.58 |
KRH72631 | Soybean | cytosol | 35.88 | 35.18 |
KRH16994 | Soybean | cytosol | 34.88 | 34.43 |
KRH63641 | Soybean | cytosol | 37.21 | 34.36 |
KRH25175 | Soybean | cytosol | 35.88 | 34.07 |
KRH54304 | Soybean | cytosol | 36.88 | 34.05 |
KRH30504 | Soybean | plastid | 35.88 | 33.23 |
KRG96144 | Soybean | nucleus | 33.89 | 33.22 |
KRH67854 | Soybean | cytosol | 33.55 | 32.79 |
KRG90008 | Soybean | plastid | 33.22 | 31.75 |
KRH14191 | Soybean | cytosol | 31.56 | 30.55 |
KRH52365 | Soybean | plastid | 33.55 | 30.33 |
KRH61697 | Soybean | plastid | 30.56 | 29.58 |
KRG92733 | Soybean | plastid | 31.89 | 29.0 |
KRH34068 | Soybean | plastid | 31.56 | 28.7 |
KRH68709 | Soybean | plastid | 28.9 | 28.52 |
KRG96948 | Soybean | plastid | 28.57 | 27.56 |
KRH05263 | Soybean | mitochondrion, plastid | 30.9 | 27.35 |
KRH15788 | Soybean | plastid | 29.57 | 26.02 |
Protein Annotations
EMBL:ACUP02006573 | EnsemblPlants:KRH34070 | EnsemblPlantsGene:GLYMA_10G160900 | EntrezGene:100778089 | InterPro:DUF868_pln | PANTHER:PTHR31972 |
PANTHER:PTHR31972:SF4 | PFAM:PF05910 | ProteinID:KRH34070 | ProteinID:KRH34070.1 | SEG:seg | UniParc:UPI000233CC54 |
UniProt:I1LBK1 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:39514267..39516118
Molecular Weight (calculated)
33719.6 Da
IEP (calculated)
8.362
GRAVY (calculated)
-0.008
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDFPSCFGE NAVQVADSSS SSSSKTAQNL VICVYQCRIW GKCCFITITW TKSLMGQGLS VGIDDYSSNQ CLCKVDIKPW VFSKRRGCKS LEAYSCKIDV
101: YWDLSNARFG VGPEPLEGFY VGVVVDRQMV LLLGDLRKEA FKKSSAIPLP SNAVFVAKKE HVFGKKMFGN KAVFCDNGQI HDLVIECDTS GVSDPCLIIR
201: IDSKTVMQVK RLKWKFRGNH TILVDGLAVE VFWDVYNWLF GGTSLGNAVF MFRTCISAEK FWAGEPLSDA NVVQWSFSQR FSETKSQGVG FSHILYAWKN
301: D
101: YWDLSNARFG VGPEPLEGFY VGVVVDRQMV LLLGDLRKEA FKKSSAIPLP SNAVFVAKKE HVFGKKMFGN KAVFCDNGQI HDLVIECDTS GVSDPCLIIR
201: IDSKTVMQVK RLKWKFRGNH TILVDGLAVE VFWDVYNWLF GGTSLGNAVF MFRTCISAEK FWAGEPLSDA NVVQWSFSQR FSETKSQGVG FSHILYAWKN
301: D
001: MKDFPSCFGE NGVQVADSSS SSNSGKNAQN LVTCIYQCRI RGRNCLITVT WTKNLMGQSV TVGVDDSCNQ SLCKVEIKPW LFTKRKGSKS LEAYSCNIDV
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE
Arabidopsis Description
At5g28150/T24G3_80 [Source:UniProtKB/TrEMBL;Acc:Q8RX84]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.