CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72631	Soybean	cytosol	69.21	71.01
KRH16994	Soybean	cytosol	68.25	70.49
CDY27882	Canola	nucleus	57.78	62.54
CDY00849	Canola	nucleus	57.78	62.54
Solyc12g044670.1.1	Tomato	plastid	60.32	61.69
PGSC0003DMT400069001	Potato	plastid	60.32	61.69
AT2G04220.1	Thale cress	cytosol	59.37	60.91
Bra015139.1-P	Field mustard	nucleus	58.1	60.6
AT4G12690.2	Thale cress	nucleus	54.6	60.35
VIT_12s0057g01390.t01	Wine grape	mitochondrion	57.78	58.33
PGSC0003DMT400006698	Potato	mitochondrion	56.83	58.12
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	56.19	55.66
CDX86317	Canola	plastid	51.43	52.77
AT5G48270.1	Thale cress	plastid	53.65	52.48
CDY05690	Canola	mitochondrion, plastid	49.84	52.33
GSMUA_AchrUn_...	Banana	cytosol	46.35	52.33
CDX85324	Canola	plastid	46.03	52.16
Bra037498.1-P	Field mustard	plastid	52.7	51.39
CDY48744	Canola	mitochondrion, plastid	49.21	50.99
CDY00069	Canola	plastid	49.84	50.97
CDY19961	Canola	plastid	49.21	50.65
Bra036180.1-P	Field mustard	plastid	51.11	50.0
Bra020708.1-P	Field mustard	mitochondrion	51.11	50.0
Zm00001d015796_P001	Maize	cytosol	28.57	46.88
GSMUA_Achr3P12010_001	Banana	cytosol	39.68	45.29
Zm00001d053654_P001	Maize	plastid	38.1	40.54
KRH14191	Soybean	cytosol	39.68	40.19
KRH57148	Soybean	cytosol	41.27	39.88
TraesCS6B01G189500.1	Wheat	cytosol	39.37	39.74
HORVU6Hr1G032720.1	Barley	cytosol	39.68	39.68
TraesCS6A01G161700.1	Wheat	cytosol	39.37	39.62
KRH03859	Soybean	cytosol	33.65	39.55
TraesCS6D01G150500.1	Wheat	nucleus	39.05	39.3
KRH54304	Soybean	cytosol	39.68	38.34
OQU84582	Sorghum	cytosol	39.05	38.32
KRH63641	Soybean	cytosol	39.05	37.73
KRH68710	Soybean	plastid	34.6	36.7
KRH32026	Soybean	cytosol, plastid	33.33	35.0
KRG95548	Soybean	cytosol	33.33	34.88
KRG96949	Soybean	cytosol, plastid	33.33	34.31
KRH71412	Soybean	cytosol	32.38	33.89
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	31.75	33.22
KRH67230	Soybean	cytosol	32.7	32.91
KRG92651	Soybean	cytosol	31.11	32.67
Os02t0198800-01	Rice	cytosol, nucleus	36.51	30.91
KRH26585	Soybean	plastid	27.3	28.57
KRH22720	Soybean	plastid	26.35	27.48
KRH25175	Soybean	cytosol	26.03	25.87
KRH52365	Soybean	plastid	26.67	25.23
KRH61697	Soybean	plastid	24.44	24.76
KRH15788	Soybean	plastid	26.67	24.56
KRH30504	Soybean	plastid	25.08	24.31
KRH05263	Soybean	mitochondrion, plastid	25.71	23.82
KRH68709	Soybean	plastid	22.86	23.61
KRG96144	Soybean	nucleus	22.22	22.8
KRG96948	Soybean	plastid	22.54	22.76
KRG92733	Soybean	plastid	23.81	22.66
KRH67854	Soybean	cytosol	21.9	22.4
KRH34068	Soybean	plastid	23.17	22.05

Protein Annotations

EMBL:ACUP02012491	EnsemblPlants:KRG90008	EnsemblPlantsGene:GLYMA_20G061200	EntrezGene:100806502	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF2	PFAM:PF05910	ProteinID:KRG90008	ProteinID:KRG90008.1	SEG:seg	UniParc:UPI000233DB62
UniProt:K7N1D0	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:19065766..19066713

Molecular Weight (calculated)

35913.7 Da

IEP (calculated)

7.867

GRAVY (calculated)

-0.353

Length

315 amino acids

Sequence
(BLAST)

001: MPFQLTFKSQ PVSNSIQGSS LVERVSEELL PFPSKSSQST VTFIYQANVA GYSRHVSVLW CKNLMNHTLN LKVDSTRGDF SYTCKIQVKP WYFWNKKGYK
101: SFEVDGHQVE VYWDLRSARF VGSSPEPGSD YYLAMVSDEE VVLLLGDQKK KAYKRMKMRP SIVEALLLVK RESVFAKKSF ATKARFDEKR KENDIVVESS
201: TFGNKEPEMW ISIDGIVLIH VKNLQWNFRG NQTVMVNKQP VQVFWDVHDW LFSVPGSGPG LFIFKAGPVE VESEKEERVN EGCDSDNGSC ASGYYSTLSY
301: APSESCLVLY AYKLE

Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)

001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.