Factsheet for Bra037498.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86317	Canola	plastid	95.05	100.0
Bra020708.1-P	Field mustard	mitochondrion	90.71	90.99
AT5G48270.1	Thale cress	plastid	90.4	90.68
Bra036180.1-P	Field mustard	plastid	89.78	90.06
Bra015139.1-P	Field mustard	nucleus	59.13	63.24
KRH16994	Soybean	cytosol	55.11	58.36
PGSC0003DMT400069001	Potato	plastid	55.11	57.79
Solyc12g044670.1.1	Tomato	plastid	55.11	57.79
VIT_12s0057g01390.t01	Wine grape	mitochondrion	55.73	57.69
KRH72631	Soybean	cytosol	54.49	57.33
PGSC0003DMT400006698	Potato	mitochondrion	51.08	53.57
KRG90008	Soybean	plastid	51.39	52.7
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	51.08	51.89
GSMUA_AchrUn_...	Banana	cytosol	44.58	51.61
GSMUA_Achr3P12010_001	Banana	cytosol	41.18	48.19
Zm00001d015796_P001	Maize	cytosol	27.55	46.35
Zm00001d053654_P001	Maize	plastid	40.56	44.26
OQU84582	Sorghum	cytosol	42.11	42.37
TraesCS6B01G189500.1	Wheat	cytosol	39.01	40.38
TraesCS6D01G150500.1	Wheat	nucleus	39.01	40.26
TraesCS6A01G161700.1	Wheat	cytosol	38.7	39.94
HORVU6Hr1G032720.1	Barley	cytosol	38.7	39.68
Bra001495.1-P	Field mustard	cytosol	33.13	36.77
Bra040118.1-P	Field mustard	plastid	31.27	35.82
Bra040410.1-P	Field mustard	cytosol, nucleus, peroxisome	31.27	35.31
Bra009991.1-P	Field mustard	plastid	31.58	34.81
Os02t0198800-01	Rice	cytosol, nucleus	38.7	33.6
Bra036119.1-P	Field mustard	mitochondrion	31.89	26.96
Bra028555.1-P	Field mustard	nucleus	26.01	24.49
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	27.86	23.2
Bra034367.1-P	Field mustard	plastid	22.91	22.77
Bra007811.1-P	Field mustard	plastid	22.29	20.57
Bra023071.1-P	Field mustard	cytosol	20.43	20.56

Protein Annotations

EnsemblPlants:Bra037498.1	EnsemblPlants:Bra037498.1-P	EnsemblPlantsGene:Bra037498	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF2
PFAM:PF05910	SEG:seg	UniParc:UPI000253F917	UniProt:M4F8T6	MapMan:35.2	:

Description

AT5G48270 (E=3e-163) | unknown protein

Coordinates

chrA06:-:21169855..21170826

Molecular Weight (calculated)

36245.1 Da

IEP (calculated)

6.719

GRAVY (calculated)

-0.205

Length

323 amino acids

Sequence
(BLAST)

001: MLSFRIPSMG TQPAAFAAKI TDTTKTVAQL KSAATPTPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMVSSLDND MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGNF VEVFWDLRSA KLSGNGSPEP VSDYYVAIVS DEEVVLLLGD LKHKAYKRTK SRPALVEGFI SFKKESIFGK KTFSTRARFD EQRKEHEVVV
201: ESSNDEKDQE MWISMDGIVL VHVKNLQWKF RGNVMVLVDR TPVMVYYDVH DWLFGSSEST ASSGLFLFKP VAVGAMMVDE YFSDAEDGDS GGGSSPLSRY
301: NSASSGYGPL HEFCLFLYAW KLE

Best Arabidopsis Sequence Match ( AT5G48270.1 )
(BLAST)

001: MLSFRMPSIG SQPTAFAAKI TDNPKTVAQL KSAASPSPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMVSSLDND MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGNF VEVFWDLRSA KLAGNGSPEP VSDYYVAVVS DEEVVLLLGD LKQKAYKRTK SRPALVEGFI YFKKESIFGK KTFSTRARFD EQRKEHEVVV
201: ESSNGAAEPE MWISVDGIVV VNVKNLQWKF RGNQMVMVDR TPVMVYYDVH DWLFASSETA ASSGLFLFKP VPVGAMVDES FSDAEEGDSG GGSSPLSRYN
301: SASSGFGPLH DFCLFLYAWK LE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9LUA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.