Factsheet for Bra020708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
plasma membrane 1
extracellular 1
vacuole 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48744	Canola	mitochondrion, plastid	93.17	98.68
Bra037498.1-P	Field mustard	plastid	90.99	90.71
AT5G48270.1	Thale cress	plastid	88.2	88.2
Bra036180.1-P	Field mustard	plastid	87.58	87.58
Bra015139.1-P	Field mustard	nucleus	56.83	60.6
VIT_12s0057g01390.t01	Wine grape	mitochondrion	55.28	57.05
KRH16994	Soybean	cytosol	54.04	57.05
Solyc12g044670.1.1	Tomato	plastid	54.04	56.49
PGSC0003DMT400069001	Potato	plastid	54.04	56.49
KRH72631	Soybean	cytosol	53.42	56.03
PGSC0003DMT400006698	Potato	mitochondrion	50.62	52.92
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	50.62	51.26
KRG90008	Soybean	plastid	50.0	51.11
GSMUA_AchrUn_...	Banana	cytosol	42.86	49.46
GSMUA_Achr3P12010_001	Banana	cytosol	40.37	47.1
Zm00001d015796_P001	Maize	cytosol	27.02	45.31
Zm00001d053654_P001	Maize	plastid	39.75	43.24
OQU84582	Sorghum	cytosol	40.99	41.12
TraesCS6B01G189500.1	Wheat	cytosol	38.51	39.74
TraesCS6D01G150500.1	Wheat	nucleus	38.2	39.3
TraesCS6A01G161700.1	Wheat	cytosol	37.89	38.98
HORVU6Hr1G032720.1	Barley	cytosol	37.89	38.73
Bra001495.1-P	Field mustard	cytosol	34.78	38.49
Bra040118.1-P	Field mustard	plastid	30.75	35.11
Bra040410.1-P	Field mustard	cytosol, nucleus, peroxisome	30.75	34.62
Bra009991.1-P	Field mustard	plastid	30.75	33.79
Os02t0198800-01	Rice	cytosol, nucleus	37.89	32.8
Bra036119.1-P	Field mustard	mitochondrion	31.06	26.18
Bra028555.1-P	Field mustard	nucleus	25.78	24.2
Bra034367.1-P	Field mustard	plastid	23.29	23.08
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	27.02	22.42
Bra023071.1-P	Field mustard	cytosol	21.12	21.18
Bra007811.1-P	Field mustard	plastid	22.05	20.29

Protein Annotations

EnsemblPlants:Bra020708.1	EnsemblPlants:Bra020708.1-P	EnsemblPlantsGene:Bra020708	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF2
PFAM:PF05910	SEG:seg	UniParc:UPI0002546155	UniProt:M4DW14	MapMan:35.2	:

Description

AT5G48270 (E=1e-160) | unknown protein

Coordinates

chrA02:-:23614779..23615747

Molecular Weight (calculated)

36148.9 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.191

Length

322 amino acids

Sequence
(BLAST)

001: MLSFRIPSIR TQPTAFAAKI TDTTKTVAQL KSAATPTPHS TVTCGYQAHV AGFFRNITVL WSKNLMNHSL TVMVSSLDND MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGNF VEVFWDLRAA KLSGNGSPEP MSDYYVAIVS DEEVVLLLGD LKHKAYKRTK SRPALVEGYI YFKKESIFGK KTFSTRARFD EQRKEHEVVV
201: ESSHGGDDPE MWISVDGIVI MHVTNLQWKF WGNQMVLVDK THVMVYYDVH DWLFGSSEST ASSGLFVFKP VAVGGMVDEY FSDAEEGDSG GGSSPLSRYN
301: SASSGYGTLN DFCLFLYAWK VV

Best Arabidopsis Sequence Match ( AT5G48270.1 )
(BLAST)

001: MLSFRMPSIG SQPTAFAAKI TDNPKTVAQL KSAASPSPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMVSSLDND MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGNF VEVFWDLRSA KLAGNGSPEP VSDYYVAVVS DEEVVLLLGD LKQKAYKRTK SRPALVEGFI YFKKESIFGK KTFSTRARFD EQRKEHEVVV
201: ESSNGAAEPE MWISVDGIVV VNVKNLQWKF RGNQMVMVDR TPVMVYYDVH DWLFASSETA ASSGLFLFKP VPVGAMVDES FSDAEEGDSG GGSSPLSRYN
301: SASSGFGPLH DFCLFLYAWK LE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9LUA7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.